MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:8947678-9258132

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pde10a	17	8525372 to 8986648	461276	+	protein coding gene	phosphodiesterase 10A
Pifs2	17	8970523 to 8970523	0		QTL	peptide-induced fatal syndrome 2
Lith3	17	8975505 to 8975624	119		QTL	lithogenic gene 3
D17Mit247	17	8975505 to 8975624	119		DNA segment	DNA segment, Chr 17, Massachusetts Institute of Technology 247
D17Pri2	17	8975535 to 8975699	164		DNA segment	DNA segment, Chr 17, Princeton University 2
1700010I14Rik	17	8988320 to 9008319	19999	+	protein coding gene	RIKEN cDNA 1700010I14 gene
Tssr142562	17	8988340 to 8988347	7	+	TSS region	transcription start site region 142562
Tssr142563	17	8988348 to 8988395	47	+	TSS region	transcription start site region 142563
Tssr142564	17	8992239 to 8992274	35	+	TSS region	transcription start site region 142564
D17Pri3	17	8992737 to 8992820	83		DNA segment	DNA segment, Chr 17, Princeton University 3
D17Mit225	17	9010494 to 9010616	122		DNA segment	DNA Segment, Chr 17, Massachusetts Institute of Technology 225
Tssr142565	17	9030614 to 9030619	5	+	TSS region	transcription start site region 142565
Cpgi8601	17	9031560 to 9031775	215		CpG island	CpG island 8601
Gm29711	17	9102678 to 9103132	454	+	lncRNA gene	predicted gene, 29711
6530411M01Rik	17	9147719 to 9167836	20117	-	lincRNA gene	RIKEN cDNA 6530411M01 gene
Cpgi8602	17	9167292 to 9167713	421		CpG island	CpG island 8602
Cpgi8603	17	9168304 to 9168479	175		CpG island	CpG island 8603
C87487	17	9189126 to 9223664	34538	+	lincRNA gene	expressed sequence C87487
Gm49806	17	9246550 to 9248548	1998	+	unclassified gene	predicted gene, 49806