Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:88675703-89725719

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gtf2a1l 17 88668660 to 88715152 46492 + protein coding gene general transcription factor IIA, 1-like
Lhcgr 17 88716861 to 88792059 75198 - protein coding gene luteinizing hormone/choriogonadotropin receptor
Cpgi9646 17 88753382 to 88753962 580 CpG island CpG island 9646
Cpgi9647 17 88754883 to 88755427 544 CpG island CpG island 9647
Cpgi9648 17 88791720 to 88792043 323 CpG island CpG island 9648
Tssr149809 17 88791978 to 88791996 18 - TSS region transcription start site region 149809
Tssr149810 17 88791999 to 88792000 1 - TSS region transcription start site region 149810
Tssr149811 17 88792007 to 88792022 15 - TSS region transcription start site region 149811
Gm9407 17 88856233 to 88856622 389 - pseudogene predicted gene 9407
Marcksl1-ps2 17 88982497 to 88983100 603 - pseudogene MARCKS-like 1, pseudogene 2
Fshr 17 88984952 to 89200675 215723 - protein coding gene follicle stimulating hormone receptor
Tssr5231 17 89099962 to 89099974 12 + TSS region transcription start site region 5231
Tssr149812 17 89200684 to 89200697 13 - TSS region transcription start site region 149812
Tssr149813 17 89200703 to 89200719 16 - TSS region transcription start site region 149813
4933400B14Rik 17 89320227 to 89327333 7106 + lncRNA gene RIKEN cDNA 4933400B14 gene
Gm4719 17 89379241 to 89384993 5752 + lncRNA gene predicted gene 4719
Gm50061 17 89701897 to 89752526 50629 - lincRNA gene predicted gene, 50061
Tssr146251 17 89718097 to 89718098 1 + TSS region transcription start site region 146251