Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:88625703-89775719

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ston1 17 88597635 to 88645724 48089 + protein coding gene stonin 1
Gm31704 17 88616493 to 88626394 9901 - lncRNA gene predicted gene, 31704
Tssr146243 17 88626530 to 88626548 18 + TSS region transcription start site region 146243
Tssr146244 17 88626549 to 88626566 17 + TSS region transcription start site region 146244
Tssr146245 17 88626569 to 88626604 35 + TSS region transcription start site region 146245
Tssr146246 17 88626747 to 88626775 28 + TSS region transcription start site region 146246
Tssr146247 17 88627359 to 88627434 75 + TSS region transcription start site region 146247
Tssr146248 17 88627438 to 88627484 46 + TSS region transcription start site region 146248
Gm31903 17 88653029 to 88654062 1033 - lncRNA gene predicted gene, 31903
Gm38460 17 88653861 to 88662686 8825 + lncRNA gene predicted gene, 38460
Gm50056 17 88662406 to 88664765 2359 - lincRNA gene predicted gene, 50056
Cpgi9645 17 88668493 to 88668775 282 CpG island CpG island 9645
Tssr146249 17 88668643 to 88668654 11 + TSS region transcription start site region 146249
Gtf2a1l 17 88668660 to 88715152 46492 + protein coding gene general transcription factor IIA, 1-like
Tssr146250 17 88668662 to 88668701 39 + TSS region transcription start site region 146250
Lhcgr 17 88716861 to 88792059 75198 - protein coding gene luteinizing hormone/choriogonadotropin receptor
Cpgi9646 17 88753382 to 88753962 580 CpG island CpG island 9646
Cpgi9647 17 88754883 to 88755427 544 CpG island CpG island 9647
Cpgi9648 17 88791720 to 88792043 323 CpG island CpG island 9648
Tssr149809 17 88791978 to 88791996 18 - TSS region transcription start site region 149809
Tssr149810 17 88791999 to 88792000 1 - TSS region transcription start site region 149810
Tssr149811 17 88792007 to 88792022 15 - TSS region transcription start site region 149811
Gm9407 17 88856233 to 88856622 389 - pseudogene predicted gene 9407
Marcksl1-ps2 17 88982497 to 88983100 603 - pseudogene MARCKS-like 1, pseudogene 2
Fshr 17 88984952 to 89200675 215723 - protein coding gene follicle stimulating hormone receptor
Tssr5231 17 89099962 to 89099974 12 + TSS region transcription start site region 5231
Tssr149812 17 89200684 to 89200697 13 - TSS region transcription start site region 149812
Tssr149813 17 89200703 to 89200719 16 - TSS region transcription start site region 149813
4933400B14Rik 17 89320227 to 89327333 7106 + lncRNA gene RIKEN cDNA 4933400B14 gene
Gm4719 17 89379241 to 89384993 5752 + lncRNA gene predicted gene 4719
Gm50061 17 89701897 to 89752526 50629 - lincRNA gene predicted gene, 50061
Tssr146251 17 89718097 to 89718098 1 + TSS region transcription start site region 146251