Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:88581549-88671566

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppp1r21 17 88530124 to 88588367 58243 + protein coding gene protein phosphatase 1, regulatory subunit 21
Tssr146240 17 88581959 to 88581974 15 + TSS region transcription start site region 146240
Tssr5230 17 88583682 to 88583725 43 + TSS region transcription start site region 5230
Cpgi9643 17 88596994 to 88597383 389 CpG island CpG island 9643
Tssr146241 17 88597619 to 88597628 9 + TSS region transcription start site region 146241
Ston1 17 88597635 to 88645724 48089 + protein coding gene stonin 1
Tssr146242 17 88597663 to 88597704 41 + TSS region transcription start site region 146242
Cpgi9644 17 88597726 to 88598093 367 CpG island CpG island 9644
Tssr149807 17 88599012 to 88599057 45 - TSS region transcription start site region 149807
Gm9406 17 88607870 to 88608544 674 - pseudogene predicted gene 9406
Gm31704 17 88616493 to 88626394 9901 - lncRNA gene predicted gene, 31704
Tssr149808 17 88625492 to 88625521 29 - TSS region transcription start site region 149808
Tssr146243 17 88626530 to 88626548 18 + TSS region transcription start site region 146243
Tssr146244 17 88626549 to 88626566 17 + TSS region transcription start site region 146244
Tssr146245 17 88626569 to 88626604 35 + TSS region transcription start site region 146245
Tssr146246 17 88626747 to 88626775 28 + TSS region transcription start site region 146246
Tssr146247 17 88627359 to 88627434 75 + TSS region transcription start site region 146247
Tssr146248 17 88627438 to 88627484 46 + TSS region transcription start site region 146248
Gm31903 17 88653029 to 88654062 1033 - lncRNA gene predicted gene, 31903
Gm38460 17 88653861 to 88662686 8825 + lncRNA gene predicted gene, 38460
Gm50056 17 88662406 to 88664765 2359 - lincRNA gene predicted gene, 50056
Cpgi9645 17 88668493 to 88668775 282 CpG island CpG island 9645
Tssr146249 17 88668643 to 88668654 11 + TSS region transcription start site region 146249
Gtf2a1l 17 88668660 to 88715152 46492 + protein coding gene general transcription factor IIA, 1-like
Tssr146250 17 88668662 to 88668701 39 + TSS region transcription start site region 146250