Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:87676986-87977221

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Msh2 17 87672557 to 87723713 51156 + protein coding gene mutS homolog 2
Tssr149784 17 87682826 to 87682827 1 - TSS region transcription start site region 149784
Tssr149785 17 87691593 to 87691627 34 - TSS region transcription start site region 149785
Cpgi9631 17 87745476 to 87746974 1498 CpG island CpG island 9631
Kcnk12 17 87745821 to 87797994 52173 - protein coding gene potassium channel, subfamily K, member 12
Cpgi9632 17 87796768 to 87799143 2375 CpG island CpG island 9632
Tssr149786 17 87798029 to 87798049 20 - TSS region transcription start site region 149786
Tssr149787 17 87798055 to 87798090 35 - TSS region transcription start site region 149787
Gm41649 17 87801387 to 87811650 10263 + lncRNA gene predicted gene, 41649
Gm50039 17 87825073 to 87838997 13924 + lincRNA gene predicted gene, 50039
Tssr146214 17 87825917 to 87825925 8 + TSS region transcription start site region 146214
Cpgi9633 17 87826307 to 87826572 265 CpG island CpG island 9633
Cpgi9634 17 87826986 to 87827221 235 CpG island CpG island 9634
Tssr146215 17 87863419 to 87863424 5 + TSS region transcription start site region 146215
Rpl36-ps4 17 87921060 to 87921425 365 + pseudogene ribosomal protein L36, pseudogene 4
Gm50040 17 87949927 to 87950385 458 + pseudogene predicted gene, 50040
Gm50041 17 87969004 to 87969220 216 - pseudogene predicted gene, 50041
Cpgi9635 17 87974429 to 87975864 1435 CpG island CpG island 9635
Tssr149788 17 87974873 to 87974911 38 - TSS region transcription start site region 149788
Tssr146216 17 87975044 to 87975085 41 + TSS region transcription start site region 146216
Msh6 17 87975062 to 87990892 15830 + protein coding gene mutS homolog 6
Tssr146217 17 87975086 to 87975107 21 + TSS region transcription start site region 146217