MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:87413673-87463690

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Stpg4	17	87389571 to 87427741	38170	-	protein coding gene	sperm tail PG rich repeat containing 4
Cpgi9625	17	87427489 to 87427911	422		CpG island	CpG island 9625
Tssr149766	17	87427690 to 87427707	17	-	TSS region	transcription start site region 149766
Tssr149767	17	87427732 to 87427741	9	-	TSS region	transcription start site region 149767
Tssr149768	17	87427773 to 87427778	5	-	TSS region	transcription start site region 149768
Calm2	17	87433412 to 87446935	13523	-	protein coding gene	calmodulin 2
Tssr149769	17	87433939 to 87433950	11	-	TSS region	transcription start site region 149769
Tssr149770	17	87438519 to 87438536	17	-	TSS region	transcription start site region 149770
Tssr149771	17	87438673 to 87438690	17	-	TSS region	transcription start site region 149771
Tssr149772	17	87440915 to 87440920	5	-	TSS region	transcription start site region 149772
Cpgi9626	17	87445751 to 87447521	1770		CpG island	CpG island 9626
Tssr146185	17	87446145 to 87446150	5	+	TSS region	transcription start site region 146185
Tssr146186	17	87446677 to 87446680	3	+	TSS region	transcription start site region 146186
Tssr149773	17	87446854 to 87446869	15	-	TSS region	transcription start site region 149773
Tssr146187	17	87447225 to 87447238	13	+	TSS region	transcription start site region 146187
Gm26005	17	87453223 to 87453356	133	-	snoRNA gene	predicted gene, 26005
Gm30794	17	87455103 to 87459462	4359	-	lncRNA gene	predicted gene, 30794
Tssr149774	17	87459453 to 87459483	30	-	TSS region	transcription start site region 149774