Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:87359453-87559483

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ttc7 17 87282886 to 87381769 98883 + protein coding gene tetratricopeptide repeat domain 7
0610012D04Rik 17 87362239 to 87364462 2223 - antisense lncRNA gene RIKEN cDNA 0610012D04 gene
Stpg4 17 87389571 to 87427741 38170 - protein coding gene sperm tail PG rich repeat containing 4
D17Mit130 17 87393770 to 87393999 229 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 130
Ltpr7 17 87393770 to 87393999 229 QTL Leishmania tropica response 7
Ltpr7a 17 87393770 to 87393999 229 QTL Leishmania tropica response 7a
Ltpr7b 17 87393770 to 87393999 229 QTL Leishmania tropica response 7b
Ltpr7c 17 87393770 to 87393999 229 QTL Leishmania tropica response 7c
Cpgi9625 17 87427489 to 87427911 422 CpG island CpG island 9625
Tssr149766 17 87427690 to 87427707 17 - TSS region transcription start site region 149766
Tssr149767 17 87427732 to 87427741 9 - TSS region transcription start site region 149767
Tssr149768 17 87427773 to 87427778 5 - TSS region transcription start site region 149768
Calm2 17 87433412 to 87446935 13523 - protein coding gene calmodulin 2
Tssr149769 17 87433939 to 87433950 11 - TSS region transcription start site region 149769
Tssr149770 17 87438519 to 87438536 17 - TSS region transcription start site region 149770
Tssr149771 17 87438673 to 87438690 17 - TSS region transcription start site region 149771
Tssr149772 17 87440915 to 87440920 5 - TSS region transcription start site region 149772
Cpgi9626 17 87445751 to 87447521 1770 CpG island CpG island 9626
Tssr146185 17 87446145 to 87446150 5 + TSS region transcription start site region 146185
Tssr146186 17 87446677 to 87446680 3 + TSS region transcription start site region 146186
Tssr149773 17 87446854 to 87446869 15 - TSS region transcription start site region 149773
Tssr146187 17 87447225 to 87447238 13 + TSS region transcription start site region 146187
Gm26005 17 87453223 to 87453356 133 - snoRNA gene predicted gene, 26005
Gm30794 17 87455103 to 87459462 4359 - lncRNA gene predicted gene, 30794
Tssr149774 17 87459453 to 87459483 30 - TSS region transcription start site region 149774
Gm30938 17 87464640 to 87473742 9102 - lncRNA gene predicted gene, 30938
Tssr149775 17 87473762 to 87473794 32 - TSS region transcription start site region 149775
Tssr149776 17 87473795 to 87473808 13 - TSS region transcription start site region 149776
Cpgi9627 17 87474016 to 87474634 618 CpG island CpG island 9627
Gm28676 17 87490748 to 87502616 11868 + lincRNA gene predicted gene 28676
Gm30984 17 87529503 to 87530744 1241 - lncRNA gene predicted gene, 30984
Tssr146188 17 87530918 to 87530925 7 + TSS region transcription start site region 146188
Gm46587 17 87559097 to 87570757 11660 - lncRNA gene predicted gene, 46587