Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:87128366-87278368

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Socs5 17 87107679 to 87137839 30160 + protein coding gene suppressor of cytokine signaling 5
Cpgi9618 17 87133951 to 87134127 176 CpG island CpG island 9618
Cpgi9619 17 87134580 to 87135154 574 CpG island CpG island 9619
Tssr146178 17 87145619 to 87145622 3 + TSS region transcription start site region 146178
Tssr146179 17 87174987 to 87174992 5 + TSS region transcription start site region 146179
Gm22346 17 87184105 to 87184225 120 - miRNA gene predicted gene, 22346
C330024C12Rik 17 87192216 to 87194942 2726 - lncRNA gene RIKEN cDNA C330024C12 gene
Tssr149758 17 87203366 to 87203368 2 - TSS region transcription start site region 149758
Gm41647 17 87206021 to 87206977 956 - lncRNA gene predicted gene, 41647
Tssr146180 17 87240944 to 87240947 3 + TSS region transcription start site region 146180
Mcfd2 17 87254443 to 87265935 11492 - protein coding gene multiple coagulation factor deficiency 2
Tssr149759 17 87264227 to 87264238 11 - TSS region transcription start site region 149759
Tssr149760 17 87264239 to 87264265 26 - TSS region transcription start site region 149760
Cpgi9620 17 87265336 to 87266318 982 CpG island CpG island 9620
Tssr149761 17 87265866 to 87265921 55 - TSS region transcription start site region 149761
Gm46586 17 87267539 to 87275371 7832 + lncRNA gene predicted gene, 46586
4833418N02Rik 17 87274886 to 87282814 7928 - lincRNA gene RIKEN cDNA 4833418N02 gene