MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:87080619-87210622

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi9615	17	87091492 to 87091782	290		CpG island	CpG island 9615
Gm30510	17	87091755 to 87107347	15592	-	lncRNA gene	predicted gene, 30510
Tssr149757	17	87101055 to 87101059	4	-	TSS region	transcription start site region 149757
Cpgi9616	17	87106734 to 87108370	1636		CpG island	CpG island 9616
Tssr5228	17	87107287 to 87107322	35	+	TSS region	transcription start site region 5228
Tssr146174	17	87107621 to 87107684	63	+	TSS region	transcription start site region 146174
Socs5	17	87107679 to 87137839	30160	+	protein coding gene	suppressor of cytokine signaling 5
Tssr146175	17	87107685 to 87107702	17	+	TSS region	transcription start site region 146175
Tssr146176	17	87116930 to 87116933	3	+	TSS region	transcription start site region 146176
Tssr146177	17	87119252 to 87119263	11	+	TSS region	transcription start site region 146177
Cpgi9617	17	87125335 to 87125698	363		CpG island	CpG island 9617
Cpgi9618	17	87133951 to 87134127	176		CpG island	CpG island 9618
Cpgi9619	17	87134580 to 87135154	574		CpG island	CpG island 9619
Tssr146178	17	87145619 to 87145622	3	+	TSS region	transcription start site region 146178
Tssr146179	17	87174987 to 87174992	5	+	TSS region	transcription start site region 146179
Gm22346	17	87184105 to 87184225	120	-	miRNA gene	predicted gene, 22346
C330024C12Rik	17	87192216 to 87194942	2726	-	lncRNA gene	RIKEN cDNA C330024C12 gene
Tssr149758	17	87203366 to 87203368	2	-	TSS region	transcription start site region 149758
Gm41647	17	87206021 to 87206977	956	-	lncRNA gene	predicted gene, 41647