Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:86968408-87078411

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rhoq 17 86963082 to 87000069 36987 + protein coding gene ras homolog family member Q
Gm50012 17 86970372 to 86975288 4916 + sense intronic lncRNA gene predicted gene, 50012
Tssr146167 17 86980933 to 86980939 6 + TSS region transcription start site region 146167
Tssr146168 17 86981083 to 86981097 14 + TSS region transcription start site region 146168
Tssr146169 17 86981115 to 86981126 11 + TSS region transcription start site region 146169
Tssr149752 17 86987153 to 86987158 5 - TSS region transcription start site region 149752
Tssr146170 17 86993746 to 86993768 22 + TSS region transcription start site region 146170
Pigf 17 86997256 to 87025406 28150 - protein coding gene phosphatidylinositol glycan anchor biosynthesis, class F
Tssr146171 17 86997842 to 86997856 14 + TSS region transcription start site region 146171
Tssr149753 17 87023408 to 87023411 3 - TSS region transcription start site region 149753
Cpgi9612 17 87024646 to 87025962 1316 CpG island CpG island 9612
Tssr149754 17 87025353 to 87025403 50 - TSS region transcription start site region 149754
Tssr149755 17 87025539 to 87025548 9 - TSS region transcription start site region 149755
Tssr146172 17 87025556 to 87025635 79 + TSS region transcription start site region 146172
Cript 17 87025561 to 87035808 10247 + protein coding gene cysteine-rich PDZ-binding protein
Gm30421 17 87039808 to 87050887 11079 - lncRNA gene predicted gene, 30421
Cpgi9613 17 87041736 to 87041987 251 CpG island CpG island 9613
Cpgi9614 17 87044497 to 87044681 184 CpG island CpG island 9614
Tssr149756 17 87050648 to 87050675 27 - TSS region transcription start site region 149756
Gm24648 17 87053694 to 87053825 131 - snoRNA gene predicted gene, 24648
Tssr146173 17 87078255 to 87078267 12 + TSS region transcription start site region 146173
Gm5499 17 87078271 to 87079155 884 + pseudogene predicted pseudogene 5499