Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:86832754-87042972

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epas1 17 86753864 to 86833410 79546 + protein coding gene endothelial PAS domain protein 1
Gm29168 17 86840030 to 86840716 686 + lincRNA gene predicted gene 29168
Tssr146155 17 86855690 to 86855695 5 + TSS region transcription start site region 146155
Tssr149749 17 86880440 to 86880446 6 - TSS region transcription start site region 149749
4933423N03Rik 17 86915620 to 86917259 1639 unclassified gene RIKEN cDNA 4933423N03 gene
Tmem247 17 86917348 to 86922367 5019 + protein coding gene transmembrane protein 247
Tssr146156 17 86917399 to 86917438 39 + TSS region transcription start site region 146156
Tssr146157 17 86917441 to 86917458 17 + TSS region transcription start site region 146157
Gm50011 17 86928973 to 86944709 15736 + lincRNA gene predicted gene, 50011
Cpgi9610 17 86937754 to 86937972 218 CpG island CpG island 9610
Atp6v1e2 17 86944109 to 86947887 3778 - protein coding gene ATPase, H+ transporting, lysosomal V1 subunit E2
Tssr149750 17 86947867 to 86947901 34 - TSS region transcription start site region 149750
Tssr149751 17 86958001 to 86958018 17 - TSS region transcription start site region 149751
Tssr146158 17 86961482 to 86961522 40 + TSS region transcription start site region 146158
Cpgi9611 17 86962248 to 86964029 1781 CpG island CpG island 9611
Tssr146159 17 86962668 to 86962687 19 + TSS region transcription start site region 146159
Tssr146160 17 86963077 to 86963094 17 + TSS region transcription start site region 146160
Rhoq 17 86963082 to 87000069 36987 + protein coding gene ras homolog family member Q
Tssr146161 17 86963246 to 86963268 22 + TSS region transcription start site region 146161
Tssr146162 17 86963279 to 86963303 24 + TSS region transcription start site region 146162
Tssr146163 17 86963318 to 86963329 11 + TSS region transcription start site region 146163
Tssr146164 17 86963330 to 86963346 16 + TSS region transcription start site region 146164
Tssr146165 17 86963399 to 86963410 11 + TSS region transcription start site region 146165
Tssr146166 17 86964315 to 86964323 8 + TSS region transcription start site region 146166
Gm50012 17 86970372 to 86975288 4916 + sense intronic lncRNA gene predicted gene, 50012
Tssr146167 17 86980933 to 86980939 6 + TSS region transcription start site region 146167
Tssr146168 17 86981083 to 86981097 14 + TSS region transcription start site region 146168
Tssr146169 17 86981115 to 86981126 11 + TSS region transcription start site region 146169
Tssr149752 17 86987153 to 86987158 5 - TSS region transcription start site region 149752
Tssr146170 17 86993746 to 86993768 22 + TSS region transcription start site region 146170
Pigf 17 86997256 to 87025406 28150 - protein coding gene phosphatidylinositol glycan anchor biosynthesis, class F
Tssr146171 17 86997842 to 86997856 14 + TSS region transcription start site region 146171
Tssr149753 17 87023408 to 87023411 3 - TSS region transcription start site region 149753
Cpgi9612 17 87024646 to 87025962 1316 CpG island CpG island 9612
Tssr149754 17 87025353 to 87025403 50 - TSS region transcription start site region 149754
Tssr149755 17 87025539 to 87025548 9 - TSS region transcription start site region 149755
Tssr146172 17 87025556 to 87025635 79 + TSS region transcription start site region 146172
Cript 17 87025561 to 87035808 10247 + protein coding gene cysteine-rich PDZ-binding protein
Gm30421 17 87039808 to 87050887 11079 - lncRNA gene predicted gene, 30421
Cpgi9613 17 87041736 to 87041987 251 CpG island CpG island 9613