Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:86195220-86674893

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prkce 17 86167785 to 86657919 490134 + protein coding gene protein kinase C, epsilon
Tssr5224 17 86223574 to 86223591 17 + TSS region transcription start site region 5224
Tssr146108 17 86223680 to 86223691 11 + TSS region transcription start site region 146108
Tssr149730 17 86230255 to 86230266 11 - TSS region transcription start site region 149730
Tssr149731 17 86230348 to 86230361 13 - TSS region transcription start site region 149731
Tssr149732 17 86230375 to 86230379 4 - TSS region transcription start site region 149732
Tssr149733 17 86230384 to 86230411 27 - TSS region transcription start site region 149733
Cpgi9606 17 86230401 to 86230744 343 CpG island CpG island 9606
Tssr149734 17 86230416 to 86230423 7 - TSS region transcription start site region 149734
4930453J04Rik 17 86230485 to 86232697 2212 unclassified gene RIKEN cDNA 4930453J04 gene
Tssr146109 17 86232742 to 86232753 11 + TSS region transcription start site region 146109
Cpgi9607 17 86257852 to 86258561 709 CpG island CpG island 9607
2010106C02Rik 17 86285167 to 86287178 2011 - antisense lncRNA gene RIKEN cDNA 2010106C02 gene
Tssr146110 17 86338582 to 86338595 13 + TSS region transcription start site region 146110
Tssr146111 17 86338602 to 86338613 11 + TSS region transcription start site region 146111
Tssr149735 17 86353852 to 86353867 15 - TSS region transcription start site region 149735
Tssr146112 17 86360321 to 86360335 14 + TSS region transcription start site region 146112
Tssr149736 17 86403970 to 86403971 1 - TSS region transcription start site region 149736
Cpgi9608 17 86418529 to 86418758 229 CpG island CpG island 9608
Tssr146113 17 86424181 to 86424211 30 + TSS region transcription start site region 146113
Gm30284 17 86425220 to 86444893 19673 - lncRNA gene predicted gene, 30284
Tssr146114 17 86428798 to 86428829 31 + TSS region transcription start site region 146114
Tssr146115 17 86439017 to 86439030 13 + TSS region transcription start site region 146115
Tssr149737 17 86444864 to 86444904 40 - TSS region transcription start site region 149737
Gm10309 17 86497732 to 86505232 7500 - protein coding gene predicted gene 10309
Tssr5225 17 86505218 to 86505225 7 - TSS region transcription start site region 5225
Tssr5226 17 86652962 to 86652964 2 - TSS region transcription start site region 5226
Tssr146116 17 86656693 to 86656698 5 + TSS region transcription start site region 146116
Tssr5227 17 86667963 to 86667969 6 + TSS region transcription start site region 5227