Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:85615508-85645681

Filter by:
41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Six3os1 17 85601932 to 85618396 16464 - lncRNA gene SIX homeobox 3, opposite strand 1
Six3 17 85613608 to 85626191 12583 + protein coding gene sine oculis-related homeobox 3
Cpgi9590 17 85616579 to 85616785 206 CpG island CpG island 9590
Gm27275 17 85616702 to 85616973 271 + unclassified non-coding RNA gene predicted gene, 27275
Cpgi9591 17 85617088 to 85617242 154 CpG island CpG island 9591
Cpgi9592 17 85617734 to 85618653 919 CpG island CpG island 9592
Gm27502 17 85618067 to 85618265 198 + unclassified non-coding RNA gene predicted gene, 27502
Tssr5219 17 85618353 to 85618354 1 - TSS region transcription start site region 5219
Tssr149713 17 85618363 to 85618370 7 - TSS region transcription start site region 149713
Tssr149714 17 85618378 to 85618402 24 - TSS region transcription start site region 149714
Tssr149715 17 85618413 to 85618420 7 - TSS region transcription start site region 149715
Tssr149716 17 85618495 to 85618504 9 - TSS region transcription start site region 149716
Tssr149717 17 85618548 to 85618553 5 - TSS region transcription start site region 149717
Tssr5220 17 85618563 to 85618568 5 - TSS region transcription start site region 5220
Tssr149718 17 85618572 to 85618581 9 - TSS region transcription start site region 149718
Tssr149719 17 85618582 to 85618593 11 - TSS region transcription start site region 149719
Gm27427 17 85619225 to 85619417 192 + unclassified non-coding RNA gene predicted gene, 27427
Gm28528 17 85619326 to 85621001 1675 - antisense lncRNA gene predicted gene 28528
Cpgi9593 17 85620753 to 85622331 1578 CpG island CpG island 9593
Tssr146086 17 85620775 to 85620788 13 + TSS region transcription start site region 146086
Tssr146087 17 85620797 to 85620809 12 + TSS region transcription start site region 146087
Tssr146088 17 85620816 to 85620843 27 + TSS region transcription start site region 146088
Tssr146089 17 85620846 to 85620855 9 + TSS region transcription start site region 146089
Tssr146090 17 85620953 to 85620978 25 + TSS region transcription start site region 146090
Tssr146091 17 85620996 to 85621012 16 + TSS region transcription start site region 146091
Tssr146092 17 85621017 to 85621026 9 + TSS region transcription start site region 146092
Tssr5221 17 85621031 to 85621041 10 + TSS region transcription start site region 5221
Tssr5222 17 85621071 to 85621089 18 - TSS region transcription start site region 5222
Tssr146093 17 85621128 to 85621164 36 + TSS region transcription start site region 146093
Tssr146094 17 85621170 to 85621249 79 + TSS region transcription start site region 146094
Tssr5223 17 85621284 to 85621294 10 + TSS region transcription start site region 5223
Tssr146095 17 85621304 to 85621325 21 + TSS region transcription start site region 146095
Cpgi9594 17 85623442 to 85624184 742 CpG island CpG island 9594
Tssr146096 17 85623919 to 85623963 44 + TSS region transcription start site region 146096
Tssr146097 17 85623969 to 85624035 66 + TSS region transcription start site region 146097
Tssr146098 17 85624209 to 85624222 13 + TSS region transcription start site region 146098
Tssr146099 17 85629109 to 85629133 24 + TSS region transcription start site region 146099
Cpgi9595 17 85630508 to 85630681 173 CpG island CpG island 9595
Nilac12 17 85633891 to 85634014 123 QTL nicotine induced locomotor activity 12
D17Mit76 17 85633891 to 85634014 123 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 76
D17Dcr25 17 85633895 to 85634024 129 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 25