Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:85361560-85611963

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Camkmt 17 85090591 to 85458589 367998 + protein coding gene calmodulin-lysine N-methyltransferase
Cpgi9580 17 85390114 to 85390385 271 CpG island CpG island 9580
Tssr146081 17 85393816 to 85393818 2 + TSS region transcription start site region 146081
Tssr146082 17 85395795 to 85395818 23 + TSS region transcription start site region 146082
Cpgi9581 17 85454688 to 85454872 184 CpG island CpG island 9581
Cpgi9582 17 85458181 to 85458340 159 CpG island CpG island 9582
Cpgi9583 17 85464824 to 85465194 370 CpG island CpG island 9583
Tssr146083 17 85465489 to 85465522 33 + TSS region transcription start site region 146083
Cpgi9584 17 85485270 to 85485433 163 CpG island CpG island 9584
Cpgi9585 17 85486560 to 85486963 403 CpG island CpG island 9585
Rpl31-ps16 17 85498633 to 85499008 375 + pseudogene ribosomal protein L31, pseudogene 16
Gm5231 17 85541628 to 85542705 1077 - pseudogene predicted gene 5231
D17Mit56 17 85552362 to 85552571 209 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 56
Gm27178 17 85599533 to 85599872 339 + pseudogene predicted gene 27178
Six3os1 17 85601932 to 85618396 16464 - lncRNA gene SIX homeobox 3, opposite strand 1
Cpgi9586 17 85607986 to 85609276 1290 CpG island CpG island 9586
Gm27435 17 85611676 to 85611763 87 + unclassified non-coding RNA gene predicted gene, 27435