Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:84980591-85568589

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppm1b 17 84956741 to 85023991 67250 + protein coding gene protein phosphatase 1B, magnesium dependent, beta isoform
Tssr146074 17 85018917 to 85018919 2 + TSS region transcription start site region 146074
Tssr146075 17 85027964 to 85027968 4 + TSS region transcription start site region 146075
Tssr146076 17 85028347 to 85028404 57 + TSS region transcription start site region 146076
Slc3a1 17 85028376 to 85064236 35860 + protein coding gene solute carrier family 3, member 1
Cpgi9577 17 85028668 to 85028884 216 CpG island CpG island 9577
Tssr146077 17 85033616 to 85033635 19 + TSS region transcription start site region 146077
Prepl 17 85063470 to 85090241 26771 - protein coding gene prolyl endopeptidase-like
Tssr149702 17 85088543 to 85088577 34 - TSS region transcription start site region 149702
Cpgi9578 17 85089882 to 85091128 1246 CpG island CpG island 9578
Tssr149703 17 85090204 to 85090275 71 - TSS region transcription start site region 149703
Camkmt 17 85090591 to 85458589 367998 + protein coding gene calmodulin-lysine N-methyltransferase
Tssr146078 17 85090620 to 85090645 25 + TSS region transcription start site region 146078
Tssr146079 17 85090647 to 85090721 74 + TSS region transcription start site region 146079
D17Mit210 17 85121685 to 85121831 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 210
Gm36826 17 85158056 to 85163671 5615 + lncRNA gene predicted gene, 36826
Tssr149704 17 85162680 to 85162687 7 - TSS region transcription start site region 149704
Cpgi9579 17 85182021 to 85182205 184 CpG island CpG island 9579
D17Mit189 17 85188166 to 85188282 116 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 189
Tssr146080 17 85190063 to 85190068 5 + TSS region transcription start site region 146080
Cpgi9580 17 85390114 to 85390385 271 CpG island CpG island 9580
Tssr146081 17 85393816 to 85393818 2 + TSS region transcription start site region 146081
Tssr146082 17 85395795 to 85395818 23 + TSS region transcription start site region 146082
Cpgi9581 17 85454688 to 85454872 184 CpG island CpG island 9581
Cpgi9582 17 85458181 to 85458340 159 CpG island CpG island 9582
Cpgi9583 17 85464824 to 85465194 370 CpG island CpG island 9583
Tssr146083 17 85465489 to 85465522 33 + TSS region transcription start site region 146083
Cpgi9584 17 85485270 to 85485433 163 CpG island CpG island 9584
Cpgi9585 17 85486560 to 85486963 403 CpG island CpG island 9585
Rpl31-ps16 17 85498633 to 85499008 375 + pseudogene ribosomal protein L31, pseudogene 16
Gm5231 17 85541628 to 85542705 1077 - pseudogene predicted gene 5231
D17Mit56 17 85552362 to 85552571 209 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 56