Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:84758506-85158527

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrpprc 17 84705247 to 84790786 85539 - protein coding gene leucine-rich PPR-motif containing
Gm49979 17 84784792 to 84788622 3830 + unclassified gene predicted gene, 49979
Cpgi9573 17 84790062 to 84791150 1088 CpG island CpG island 9573
Tssr149694 17 84790517 to 84790585 68 - TSS region transcription start site region 149694
Tssr149695 17 84790811 to 84790829 18 - TSS region transcription start site region 149695
Tssr5217 17 84793824 to 84793827 3 + TSS region transcription start site region 5217
Gm46582 17 84816338 to 84819469 3131 + lncRNA gene predicted gene, 46582
Gm49981 17 84823256 to 84840296 17040 - lincRNA gene predicted gene, 49981
Gm9400 17 84852538 to 84853451 913 + pseudogene predicted gene 9400
Cpgi9574 17 84852572 to 84852945 373 CpG island CpG island 9574
Tssr149696 17 84855353 to 84855359 6 - TSS region transcription start site region 149696
Tssr149697 17 84860016 to 84860030 14 - TSS region transcription start site region 149697
Tssr149698 17 84879169 to 84879193 24 - TSS region transcription start site region 149698
Tssr146068 17 84893796 to 84893832 36 + TSS region transcription start site region 146068
Gm49982 17 84902160 to 84902569 409 - pseudogene predicted gene, 49982
1110020A21Rik 17 84917182 to 84957710 40528 - lincRNA gene RIKEN cDNA 1110020A21 gene
Tssr146069 17 84956718 to 84956745 27 + TSS region transcription start site region 146069
Ppm1b 17 84956741 to 85023991 67250 + protein coding gene protein phosphatase 1B, magnesium dependent, beta isoform
Tssr5218 17 84956940 to 84956945 5 - TSS region transcription start site region 5218
Cpgi9575 17 84957093 to 84957337 244 CpG island CpG island 9575
Tssr146070 17 84957126 to 84957138 12 + TSS region transcription start site region 146070
Cpgi9576 17 84957650 to 84958881 1231 CpG island CpG island 9576
Tssr146071 17 84957993 to 84958018 25 + TSS region transcription start site region 146071
Tssr149699 17 84958487 to 84958498 11 - TSS region transcription start site region 149699
Tssr149700 17 84958506 to 84958527 21 - TSS region transcription start site region 149700
Tssr149701 17 84958536 to 84958553 17 - TSS region transcription start site region 149701
Tssr146072 17 84962986 to 84962990 4 + TSS region transcription start site region 146072
Tssr146073 17 84965031 to 84965050 19 + TSS region transcription start site region 146073
Tssr146074 17 85018917 to 85018919 2 + TSS region transcription start site region 146074
Tssr146075 17 85027964 to 85027968 4 + TSS region transcription start site region 146075
Tssr146076 17 85028347 to 85028404 57 + TSS region transcription start site region 146076
Slc3a1 17 85028376 to 85064236 35860 + protein coding gene solute carrier family 3, member 1
Cpgi9577 17 85028668 to 85028884 216 CpG island CpG island 9577
Tssr146077 17 85033616 to 85033635 19 + TSS region transcription start site region 146077
Prepl 17 85063470 to 85090241 26771 - protein coding gene prolyl endopeptidase-like
Tssr149702 17 85088543 to 85088577 34 - TSS region transcription start site region 149702
Cpgi9578 17 85089882 to 85091128 1246 CpG island CpG island 9578
Tssr149703 17 85090204 to 85090275 71 - TSS region transcription start site region 149703
Camkmt 17 85090591 to 85458589 367998 + protein coding gene calmodulin-lysine N-methyltransferase
Tssr146078 17 85090620 to 85090645 25 + TSS region transcription start site region 146078
Tssr146079 17 85090647 to 85090721 74 + TSS region transcription start site region 146079
D17Mit210 17 85121685 to 85121831 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 210
Gm36826 17 85158056 to 85163671 5615 + lncRNA gene predicted gene, 36826