Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:84478133-84888141

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41642 17 84477267 to 84504655 27388 - lncRNA gene predicted gene, 41642
D17Dcr24 17 84501615 to 84501719 104 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 24
D17Mit155 17 84501619 to 84501758 139 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 155
Tssr146050 17 84511550 to 84511561 11 + TSS region transcription start site region 146050
Cpgi9568 17 84511593 to 84512688 1095 CpG island CpG island 9568
Tssr146051 17 84511832 to 84511913 81 + TSS region transcription start site region 146051
Plekhh2 17 84511895 to 84622138 110243 + protein coding gene pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
Tssr149686 17 84512121 to 84512140 19 - TSS region transcription start site region 149686
Tssr146052 17 84512228 to 84512240 12 + TSS region transcription start site region 146052
Tssr149687 17 84543247 to 84543261 14 - TSS region transcription start site region 149687
Tssr149688 17 84543262 to 84543272 10 - TSS region transcription start site region 149688
4930500A05Rik 17 84545947 to 84566824 20877 - lncRNA gene RIKEN cDNA 4930500A05 gene
Cpgi9569 17 84546523 to 84546701 178 CpG island CpG island 9569
Gm49969 17 84575877 to 84626395 50518 - antisense lncRNA gene predicted gene, 49969
Tssr146053 17 84576289 to 84576293 4 + TSS region transcription start site region 146053
Tssr146054 17 84613163 to 84613175 12 + TSS region transcription start site region 146054
Tssr146055 17 84613231 to 84613252 21 + TSS region transcription start site region 146055
Gm26066 17 84624402 to 84624510 108 + snRNA gene predicted gene, 26066
Cpgi9570 17 84626357 to 84626761 404 CpG island CpG island 9570
Tssr146056 17 84626458 to 84626512 54 + TSS region transcription start site region 146056
Dync2li1 17 84626496 to 84655568 29072 + protein coding gene dynein cytoplasmic 2 light intermediate chain 1
Tssr146057 17 84626516 to 84626529 13 + TSS region transcription start site region 146057
Abcg5 17 84658234 to 84683011 24777 - protein coding gene ATP binding cassette subfamily G member 5
Lith9 17 84658234 to 84683011 24777 QTL lithogenic gene 9
Cpgi9571 17 84675914 to 84676415 501 CpG island CpG island 9571
Abcg8 17 84676302 to 84700333 24031 + protein coding gene ATP binding cassette subfamily G member 8
Tssr149689 17 84676962 to 84676965 3 - TSS region transcription start site region 149689
Tssr149690 17 84682871 to 84682882 11 - TSS region transcription start site region 149690
Tssr149691 17 84682885 to 84682914 29 - TSS region transcription start site region 149691
Tssr149692 17 84682932 to 84682944 12 - TSS region transcription start site region 149692
Tssr146058 17 84683023 to 84683024 1 + TSS region transcription start site region 146058
Tssr146059 17 84683084 to 84683089 5 + TSS region transcription start site region 146059
Tssr146060 17 84683090 to 84683104 14 + TSS region transcription start site region 146060
Tssr146061 17 84683113 to 84683128 15 + TSS region transcription start site region 146061
Tssr146062 17 84683133 to 84683141 8 + TSS region transcription start site region 146062
Tssr146063 17 84683150 to 84683157 7 + TSS region transcription start site region 146063
Tssr146064 17 84683159 to 84683185 26 + TSS region transcription start site region 146064
Tssr146065 17 84683190 to 84683193 3 + TSS region transcription start site region 146065
Tssr146066 17 84683201 to 84683208 7 + TSS region transcription start site region 146066
Cpgi9572 17 84692370 to 84692683 313 CpG island CpG island 9572
Lrpprc 17 84705247 to 84790786 85539 - protein coding gene leucine-rich PPR-motif containing
Tssr149693 17 84716688 to 84716717 29 - TSS region transcription start site region 149693
Tssr146067 17 84738789 to 84738792 3 + TSS region transcription start site region 146067
Gm49979 17 84784792 to 84788622 3830 + unclassified gene predicted gene, 49979
Cpgi9573 17 84790062 to 84791150 1088 CpG island CpG island 9573
Tssr149694 17 84790517 to 84790585 68 - TSS region transcription start site region 149694
Tssr149695 17 84790811 to 84790829 18 - TSS region transcription start site region 149695
Tssr5217 17 84793824 to 84793827 3 + TSS region transcription start site region 5217
Gm46582 17 84816338 to 84819469 3131 + lncRNA gene predicted gene, 46582
Gm49981 17 84823256 to 84840296 17040 - lincRNA gene predicted gene, 49981
Gm9400 17 84852538 to 84853451 913 + pseudogene predicted gene 9400
Cpgi9574 17 84852572 to 84852945 373 CpG island CpG island 9574
Tssr149696 17 84855353 to 84855359 6 - TSS region transcription start site region 149696
Tssr149697 17 84860016 to 84860030 14 - TSS region transcription start site region 149697
Tssr149698 17 84879169 to 84879193 24 - TSS region transcription start site region 149698