Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:84216186-84716245

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm36279 17 84189288 to 84219293 30005 + lncRNA gene predicted gene, 36279
Thada 17 84190076 to 84466205 276129 - protein coding gene thyroid adenoma associated
Tssr146047 17 84226578 to 84226579 1 + TSS region transcription start site region 146047
Tssr5216 17 84235860 to 84235877 17 + TSS region transcription start site region 5216
Tssr149673 17 84273040 to 84273073 33 - TSS region transcription start site region 149673
Tssr149674 17 84273095 to 84273102 7 - TSS region transcription start site region 149674
Tssr149675 17 84273108 to 84273140 32 - TSS region transcription start site region 149675
Gm24492 17 84287641 to 84287747 106 - snRNA gene predicted gene, 24492
Tssr149676 17 84306324 to 84306335 11 - TSS region transcription start site region 149676
Tssr149677 17 84313619 to 84313631 12 - TSS region transcription start site region 149677
Tssr149678 17 84313644 to 84313645 1 - TSS region transcription start site region 149678
Tssr149679 17 84313662 to 84313669 7 - TSS region transcription start site region 149679
Tssr149680 17 84313676 to 84313696 20 - TSS region transcription start site region 149680
Tssr146048 17 84313843 to 84313846 3 + TSS region transcription start site region 146048
D17Mit41 17 84335603 to 84335805 202 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 41
Tssr149681 17 84355006 to 84355020 14 - TSS region transcription start site region 149681
Tssr149682 17 84380463 to 84380477 14 - TSS region transcription start site region 149682
Gm24722 17 84391429 to 84391535 106 + snRNA gene predicted gene, 24722
Tssr149683 17 84419468 to 84419482 14 - TSS region transcription start site region 149683
Cpgi9567 17 84465621 to 84466631 1010 CpG island CpG island 9567
Tssr149684 17 84466173 to 84466184 11 - TSS region transcription start site region 149684
Tssr149685 17 84466186 to 84466245 59 - TSS region transcription start site region 149685
Tssr146049 17 84466349 to 84466364 15 + TSS region transcription start site region 146049
Gm41642 17 84477267 to 84504655 27388 - lncRNA gene predicted gene, 41642
D17Dcr24 17 84501615 to 84501719 104 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 24
D17Mit155 17 84501619 to 84501758 139 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 155
Tssr146050 17 84511550 to 84511561 11 + TSS region transcription start site region 146050
Cpgi9568 17 84511593 to 84512688 1095 CpG island CpG island 9568
Tssr146051 17 84511832 to 84511913 81 + TSS region transcription start site region 146051
Plekhh2 17 84511895 to 84622138 110243 + protein coding gene pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
Tssr149686 17 84512121 to 84512140 19 - TSS region transcription start site region 149686
Tssr146052 17 84512228 to 84512240 12 + TSS region transcription start site region 146052
Tssr149687 17 84543247 to 84543261 14 - TSS region transcription start site region 149687
Tssr149688 17 84543262 to 84543272 10 - TSS region transcription start site region 149688
4930500A05Rik 17 84545947 to 84566824 20877 - lncRNA gene RIKEN cDNA 4930500A05 gene
Cpgi9569 17 84546523 to 84546701 178 CpG island CpG island 9569
Gm49969 17 84575877 to 84626395 50518 - antisense lncRNA gene predicted gene, 49969
Tssr146053 17 84576289 to 84576293 4 + TSS region transcription start site region 146053
Tssr146054 17 84613163 to 84613175 12 + TSS region transcription start site region 146054
Tssr146055 17 84613231 to 84613252 21 + TSS region transcription start site region 146055
Gm26066 17 84624402 to 84624510 108 + snRNA gene predicted gene, 26066
Cpgi9570 17 84626357 to 84626761 404 CpG island CpG island 9570
Tssr146056 17 84626458 to 84626512 54 + TSS region transcription start site region 146056
Dync2li1 17 84626496 to 84655568 29072 + protein coding gene dynein cytoplasmic 2 light intermediate chain 1
Tssr146057 17 84626516 to 84626529 13 + TSS region transcription start site region 146057
Abcg5 17 84658234 to 84683011 24777 - protein coding gene ATP binding cassette subfamily G member 5
Lith9 17 84658234 to 84683011 24777 QTL lithogenic gene 9
Cpgi9571 17 84675914 to 84676415 501 CpG island CpG island 9571
Abcg8 17 84676302 to 84700333 24031 + protein coding gene ATP binding cassette subfamily G member 8
Tssr149689 17 84676962 to 84676965 3 - TSS region transcription start site region 149689
Tssr149690 17 84682871 to 84682882 11 - TSS region transcription start site region 149690
Tssr149691 17 84682885 to 84682914 29 - TSS region transcription start site region 149691
Tssr149692 17 84682932 to 84682944 12 - TSS region transcription start site region 149692
Tssr146058 17 84683023 to 84683024 1 + TSS region transcription start site region 146058
Tssr146059 17 84683084 to 84683089 5 + TSS region transcription start site region 146059
Tssr146060 17 84683090 to 84683104 14 + TSS region transcription start site region 146060
Tssr146061 17 84683113 to 84683128 15 + TSS region transcription start site region 146061
Tssr146062 17 84683133 to 84683141 8 + TSS region transcription start site region 146062
Tssr146063 17 84683150 to 84683157 7 + TSS region transcription start site region 146063
Tssr146064 17 84683159 to 84683185 26 + TSS region transcription start site region 146064
Tssr146065 17 84683190 to 84683193 3 + TSS region transcription start site region 146065
Tssr146066 17 84683201 to 84683208 7 + TSS region transcription start site region 146066
Cpgi9572 17 84692370 to 84692683 313 CpG island CpG island 9572
Lrpprc 17 84705247 to 84790786 85539 - protein coding gene leucine-rich PPR-motif containing