Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:83988582-84178614

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr149619 17 83990472 to 83990480 8 - TSS region transcription start site region 149619
Tssr146022 17 83998539 to 83998554 15 + TSS region transcription start site region 146022
8430430B14Rik 17 83998554 to 84013408 14854 + lncRNA gene RIKEN cDNA 8430430B14 gene
Tssr146023 17 84002297 to 84002305 8 + TSS region transcription start site region 146023
Tssr149620 17 84004028 to 84004041 13 - TSS region transcription start site region 149620
Tssr149621 17 84004347 to 84004359 12 - TSS region transcription start site region 149621
Tssr149622 17 84006864 to 84006873 9 - TSS region transcription start site region 149622
Gm37549 17 84012992 to 84017056 4064 - unclassified gene predicted gene, 37549
Gm35551 17 84020663 to 84026019 5356 - lncRNA gene predicted gene, 35551
Tssr149623 17 84025966 to 84026004 38 - TSS region transcription start site region 149623
Cpgi9562 17 84028382 to 84029027 645 CpG island CpG island 9562
Gm49967 17 84036890 to 84038262 1372 + lincRNA gene predicted gene, 49967
Tssr149624 17 84050023 to 84050042 19 - TSS region transcription start site region 149624
Cpgi9563 17 84067095 to 84067442 347 CpG island CpG island 9563
Tssr149625 17 84073752 to 84073765 13 - TSS region transcription start site region 149625
4933433H22Rik 17 84078660 to 84089875 11215 + lncRNA gene RIKEN cDNA 4933433H22 gene
Tssr149626 17 84083582 to 84083614 32 - TSS region transcription start site region 149626
Tssr149627 17 84083645 to 84083658 13 - TSS region transcription start site region 149627
Tssr146024 17 84086611 to 84086621 10 + TSS region transcription start site region 146024
Cpgi9564 17 84096321 to 84097213 892 CpG island CpG island 9564
Tssr146025 17 84100802 to 84100818 16 + TSS region transcription start site region 146025
Tssr146026 17 84100836 to 84100863 27 + TSS region transcription start site region 146026
Tssr149628 17 84103504 to 84103526 22 - TSS region transcription start site region 149628
Tssr146027 17 84103634 to 84103648 14 + TSS region transcription start site region 146027
Tssr149629 17 84106403 to 84106426 23 - TSS region transcription start site region 149629
Tssr146028 17 84108182 to 84108223 41 + TSS region transcription start site region 146028
Tssr149630 17 84115367 to 84115374 7 - TSS region transcription start site region 149630
Tssr146029 17 84116863 to 84116879 16 + TSS region transcription start site region 146029
Tssr5213 17 84117057 to 84117075 18 + TSS region transcription start site region 5213
Tssr5214 17 84117838 to 84117852 14 - TSS region transcription start site region 5214
Tssr149631 17 84119207 to 84119218 11 - TSS region transcription start site region 149631
Tssr146030 17 84119435 to 84119450 15 + TSS region transcription start site region 146030
Tssr146031 17 84119869 to 84119882 13 + TSS region transcription start site region 146031
Tssr146032 17 84119911 to 84119920 9 + TSS region transcription start site region 146032
Tssr149632 17 84121558 to 84121570 12 - TSS region transcription start site region 149632
Tssr149633 17 84121584 to 84121608 24 - TSS region transcription start site region 149633
Tssr146033 17 84125108 to 84125116 8 + TSS region transcription start site region 146033
Tssr149634 17 84125999 to 84126040 41 - TSS region transcription start site region 149634
Tssr149635 17 84126248 to 84126281 33 - TSS region transcription start site region 149635
Tssr149636 17 84126298 to 84126316 18 - TSS region transcription start site region 149636
Tssr146034 17 84126391 to 84126418 27 + TSS region transcription start site region 146034
Tssr149637 17 84127107 to 84127123 16 - TSS region transcription start site region 149637
Tssr149638 17 84128382 to 84128396 14 - TSS region transcription start site region 149638
Gm19696 17 84134033 to 84156440 22407 - lncRNA gene predicted gene, 19696
Tssr149639 17 84135389 to 84135402 13 - TSS region transcription start site region 149639
Tssr149640 17 84137197 to 84137207 10 - TSS region transcription start site region 149640
Tssr149641 17 84137230 to 84137243 13 - TSS region transcription start site region 149641
Tssr5215 17 84137884 to 84137887 3 - TSS region transcription start site region 5215
Tssr149642 17 84140956 to 84140985 29 - TSS region transcription start site region 149642
Tssr146035 17 84142891 to 84142898 7 + TSS region transcription start site region 146035
Tssr149643 17 84145883 to 84145894 11 - TSS region transcription start site region 149643
Tssr149644 17 84145916 to 84145938 22 - TSS region transcription start site region 149644
Tssr146036 17 84146100 to 84146116 16 + TSS region transcription start site region 146036
Tssr149645 17 84156398 to 84156410 12 - TSS region transcription start site region 149645
Tssr149646 17 84156421 to 84156433 12 - TSS region transcription start site region 149646
Gm41640 17 84159945 to 84182931 22986 - lncRNA gene predicted gene, 41640
Tssr149647 17 84161228 to 84161245 17 - TSS region transcription start site region 149647