Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:83857095-84277442

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120 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi9561 17 83861388 to 83862384 996 CpG island CpG island 9561
n-TIaat17 17 83861944 to 83862036 92 + tRNA gene nuclear encoded tRNA isoleucine 17 (anticodon TAT)
Gm35125 17 83864414 to 83874722 10308 - lncRNA gene predicted gene, 35125
Tssr149618 17 83874683 to 83874707 24 - TSS region transcription start site region 149618
Tssr146015 17 83905648 to 83905656 8 + TSS region transcription start site region 146015
D17Mit75 17 83911825 to 83911973 148 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 75
Tssr146016 17 83917931 to 83917949 18 + TSS region transcription start site region 146016
1810073O08Rik 17 83917937 to 83921606 3669 + lncRNA gene RIKEN cDNA 1810073O08 gene
Gm23905 17 83947588 to 83947696 108 + rRNA gene predicted gene, 23905
Gm41639 17 83950991 to 83952463 1472 - lncRNA gene predicted gene, 41639
Gm35229 17 83956248 to 83957523 1275 + lncRNA gene predicted gene, 35229
Gm41638 17 83959868 to 83960930 1062 - lncRNA gene predicted gene, 41638
Gm35457 17 83963975 to 83970464 6489 + lncRNA gene predicted gene, 35457
Tssr146017 17 83976141 to 83976150 9 + TSS region transcription start site region 146017
Tssr146018 17 83980541 to 83980572 31 + TSS region transcription start site region 146018
Tssr146019 17 83980573 to 83980623 50 + TSS region transcription start site region 146019
Tssr146020 17 83985667 to 83985670 3 + TSS region transcription start site region 146020
Tssr146021 17 83986393 to 83986400 7 + TSS region transcription start site region 146021
Tssr149619 17 83990472 to 83990480 8 - TSS region transcription start site region 149619
Tssr146022 17 83998539 to 83998554 15 + TSS region transcription start site region 146022
8430430B14Rik 17 83998554 to 84013408 14854 + lncRNA gene RIKEN cDNA 8430430B14 gene
Tssr146023 17 84002297 to 84002305 8 + TSS region transcription start site region 146023
Tssr149620 17 84004028 to 84004041 13 - TSS region transcription start site region 149620
Tssr149621 17 84004347 to 84004359 12 - TSS region transcription start site region 149621
Tssr149622 17 84006864 to 84006873 9 - TSS region transcription start site region 149622
Gm37549 17 84012992 to 84017056 4064 - unclassified gene predicted gene, 37549
Gm35551 17 84020663 to 84026019 5356 - lncRNA gene predicted gene, 35551
Tssr149623 17 84025966 to 84026004 38 - TSS region transcription start site region 149623
Cpgi9562 17 84028382 to 84029027 645 CpG island CpG island 9562
Gm49967 17 84036890 to 84038262 1372 + lincRNA gene predicted gene, 49967
Tssr149624 17 84050023 to 84050042 19 - TSS region transcription start site region 149624
Cpgi9563 17 84067095 to 84067442 347 CpG island CpG island 9563
Tssr149625 17 84073752 to 84073765 13 - TSS region transcription start site region 149625
4933433H22Rik 17 84078660 to 84089875 11215 + lncRNA gene RIKEN cDNA 4933433H22 gene
Tssr149626 17 84083582 to 84083614 32 - TSS region transcription start site region 149626
Tssr149627 17 84083645 to 84083658 13 - TSS region transcription start site region 149627
Tssr146024 17 84086611 to 84086621 10 + TSS region transcription start site region 146024
Cpgi9564 17 84096321 to 84097213 892 CpG island CpG island 9564
Tssr146025 17 84100802 to 84100818 16 + TSS region transcription start site region 146025
Tssr146026 17 84100836 to 84100863 27 + TSS region transcription start site region 146026
Tssr149628 17 84103504 to 84103526 22 - TSS region transcription start site region 149628
Tssr146027 17 84103634 to 84103648 14 + TSS region transcription start site region 146027
Tssr149629 17 84106403 to 84106426 23 - TSS region transcription start site region 149629
Tssr146028 17 84108182 to 84108223 41 + TSS region transcription start site region 146028
Tssr149630 17 84115367 to 84115374 7 - TSS region transcription start site region 149630
Tssr146029 17 84116863 to 84116879 16 + TSS region transcription start site region 146029
Tssr5213 17 84117057 to 84117075 18 + TSS region transcription start site region 5213
Tssr5214 17 84117838 to 84117852 14 - TSS region transcription start site region 5214
Tssr149631 17 84119207 to 84119218 11 - TSS region transcription start site region 149631
Tssr146030 17 84119435 to 84119450 15 + TSS region transcription start site region 146030
Tssr146031 17 84119869 to 84119882 13 + TSS region transcription start site region 146031
Tssr146032 17 84119911 to 84119920 9 + TSS region transcription start site region 146032
Tssr149632 17 84121558 to 84121570 12 - TSS region transcription start site region 149632
Tssr149633 17 84121584 to 84121608 24 - TSS region transcription start site region 149633
Tssr146033 17 84125108 to 84125116 8 + TSS region transcription start site region 146033
Tssr149634 17 84125999 to 84126040 41 - TSS region transcription start site region 149634
Tssr149635 17 84126248 to 84126281 33 - TSS region transcription start site region 149635
Tssr149636 17 84126298 to 84126316 18 - TSS region transcription start site region 149636
Tssr146034 17 84126391 to 84126418 27 + TSS region transcription start site region 146034
Tssr149637 17 84127107 to 84127123 16 - TSS region transcription start site region 149637
Tssr149638 17 84128382 to 84128396 14 - TSS region transcription start site region 149638
Gm19696 17 84134033 to 84156440 22407 - lncRNA gene predicted gene, 19696
Tssr149639 17 84135389 to 84135402 13 - TSS region transcription start site region 149639
Tssr149640 17 84137197 to 84137207 10 - TSS region transcription start site region 149640
Tssr149641 17 84137230 to 84137243 13 - TSS region transcription start site region 149641
Tssr5215 17 84137884 to 84137887 3 - TSS region transcription start site region 5215
Tssr149642 17 84140956 to 84140985 29 - TSS region transcription start site region 149642
Tssr146035 17 84142891 to 84142898 7 + TSS region transcription start site region 146035
Tssr149643 17 84145883 to 84145894 11 - TSS region transcription start site region 149643
Tssr149644 17 84145916 to 84145938 22 - TSS region transcription start site region 149644
Tssr146036 17 84146100 to 84146116 16 + TSS region transcription start site region 146036
Tssr149645 17 84156398 to 84156410 12 - TSS region transcription start site region 149645
Tssr149646 17 84156421 to 84156433 12 - TSS region transcription start site region 149646
Gm41640 17 84159945 to 84182931 22986 - lncRNA gene predicted gene, 41640
Tssr149647 17 84161228 to 84161245 17 - TSS region transcription start site region 149647
Tssr149648 17 84180733 to 84180750 17 - TSS region transcription start site region 149648
Tssr146037 17 84180949 to 84180985 36 + TSS region transcription start site region 146037
Tssr146038 17 84181218 to 84181239 21 + TSS region transcription start site region 146038
Tssr146039 17 84181616 to 84181654 38 + TSS region transcription start site region 146039
Tssr146040 17 84181926 to 84181963 37 + TSS region transcription start site region 146040
Tssr146041 17 84181974 to 84182001 27 + TSS region transcription start site region 146041
Tssr146042 17 84182003 to 84182014 11 + TSS region transcription start site region 146042
Tssr149649 17 84183561 to 84183592 31 - TSS region transcription start site region 149649
Tssr146043 17 84183763 to 84183772 9 + TSS region transcription start site region 146043
Zfp36l2 17 84183931 to 84187947 4016 - protein coding gene zinc finger protein 36, C3H type-like 2
Tssr149650 17 84185564 to 84185587 23 - TSS region transcription start site region 149650
Cpgi9565 17 84185598 to 84187252 1654 CpG island CpG island 9565
Tssr149651 17 84185602 to 84185641 39 - TSS region transcription start site region 149651
Tssr146044 17 84185746 to 84185761 15 + TSS region transcription start site region 146044
Tssr149652 17 84185987 to 84186021 34 - TSS region transcription start site region 149652
Tssr149653 17 84186035 to 84186073 38 - TSS region transcription start site region 149653
Tssr149654 17 84186175 to 84186197 22 - TSS region transcription start site region 149654
Tssr149655 17 84186271 to 84186341 70 - TSS region transcription start site region 149655
Tssr149656 17 84186361 to 84186382 21 - TSS region transcription start site region 149656
Tssr149657 17 84186577 to 84186612 35 - TSS region transcription start site region 149657
Tssr149658 17 84186634 to 84186655 21 - TSS region transcription start site region 149658
Tssr149659 17 84186669 to 84186691 22 - TSS region transcription start site region 149659
Tssr149660 17 84186700 to 84186717 17 - TSS region transcription start site region 149660
Tssr149661 17 84186749 to 84186780 31 - TSS region transcription start site region 149661
Tssr149662 17 84186808 to 84186820 12 - TSS region transcription start site region 149662
Tssr149663 17 84186872 to 84186889 17 - TSS region transcription start site region 149663
Tssr149664 17 84186913 to 84186932 19 - TSS region transcription start site region 149664
Tssr149665 17 84186958 to 84187004 46 - TSS region transcription start site region 149665
Tssr149666 17 84187027 to 84187066 39 - TSS region transcription start site region 149666
Tssr146045 17 84187090 to 84187117 27 + TSS region transcription start site region 146045
Tssr149667 17 84187116 to 84187166 50 - TSS region transcription start site region 149667
Tssr149668 17 84187171 to 84187190 19 - TSS region transcription start site region 149668
Tssr149669 17 84187204 to 84187252 48 - TSS region transcription start site region 149669
Cpgi9566 17 84187611 to 84189022 1411 CpG island CpG island 9566
Tssr149670 17 84187737 to 84187757 20 - TSS region transcription start site region 149670
Tssr149671 17 84187827 to 84187899 72 - TSS region transcription start site region 149671
Tssr149672 17 84187939 to 84187954 15 - TSS region transcription start site region 149672
Tssr146046 17 84188604 to 84188626 22 + TSS region transcription start site region 146046
Gm36279 17 84189288 to 84219293 30005 + lncRNA gene predicted gene, 36279
Thada 17 84190076 to 84466205 276129 - protein coding gene thyroid adenoma associated
Tssr146047 17 84226578 to 84226579 1 + TSS region transcription start site region 146047
Tssr5216 17 84235860 to 84235877 17 + TSS region transcription start site region 5216
Tssr149673 17 84273040 to 84273073 33 - TSS region transcription start site region 149673
Tssr149674 17 84273095 to 84273102 7 - TSS region transcription start site region 149674
Tssr149675 17 84273108 to 84273140 32 - TSS region transcription start site region 149675