Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:83850991-84052463

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
C430042M11Rik 17 83851675 to 83854418 2743 - lincRNA gene RIKEN cDNA C430042M11 gene
Tssr146014 17 83856936 to 83856949 13 + TSS region transcription start site region 146014
Cpgi9561 17 83861388 to 83862384 996 CpG island CpG island 9561
n-TIaat17 17 83861944 to 83862036 92 + tRNA gene nuclear encoded tRNA isoleucine 17 (anticodon TAT)
Gm35125 17 83864414 to 83874722 10308 - lncRNA gene predicted gene, 35125
Tssr149618 17 83874683 to 83874707 24 - TSS region transcription start site region 149618
Tssr146015 17 83905648 to 83905656 8 + TSS region transcription start site region 146015
D17Mit75 17 83911825 to 83911973 148 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 75
Tssr146016 17 83917931 to 83917949 18 + TSS region transcription start site region 146016
1810073O08Rik 17 83917937 to 83921606 3669 + lncRNA gene RIKEN cDNA 1810073O08 gene
Gm23905 17 83947588 to 83947696 108 + rRNA gene predicted gene, 23905
Gm41639 17 83950991 to 83952463 1472 - lncRNA gene predicted gene, 41639
Gm35229 17 83956248 to 83957523 1275 + lncRNA gene predicted gene, 35229
Gm41638 17 83959868 to 83960930 1062 - lncRNA gene predicted gene, 41638
Gm35457 17 83963975 to 83970464 6489 + lncRNA gene predicted gene, 35457
Tssr146017 17 83976141 to 83976150 9 + TSS region transcription start site region 146017
Tssr146018 17 83980541 to 83980572 31 + TSS region transcription start site region 146018
Tssr146019 17 83980573 to 83980623 50 + TSS region transcription start site region 146019
Tssr146020 17 83985667 to 83985670 3 + TSS region transcription start site region 146020
Tssr146021 17 83986393 to 83986400 7 + TSS region transcription start site region 146021
Tssr149619 17 83990472 to 83990480 8 - TSS region transcription start site region 149619
Tssr146022 17 83998539 to 83998554 15 + TSS region transcription start site region 146022
8430430B14Rik 17 83998554 to 84013408 14854 + lncRNA gene RIKEN cDNA 8430430B14 gene
Tssr146023 17 84002297 to 84002305 8 + TSS region transcription start site region 146023
Tssr149620 17 84004028 to 84004041 13 - TSS region transcription start site region 149620
Tssr149621 17 84004347 to 84004359 12 - TSS region transcription start site region 149621
Tssr149622 17 84006864 to 84006873 9 - TSS region transcription start site region 149622
Gm37549 17 84012992 to 84017056 4064 - unclassified gene predicted gene, 37549
Gm35551 17 84020663 to 84026019 5356 - lncRNA gene predicted gene, 35551
Tssr149623 17 84025966 to 84026004 38 - TSS region transcription start site region 149623
Cpgi9562 17 84028382 to 84029027 645 CpG island CpG island 9562
Gm49967 17 84036890 to 84038262 1372 + lincRNA gene predicted gene, 49967
Tssr149624 17 84050023 to 84050042 19 - TSS region transcription start site region 149624