Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:83789868-84130930

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91 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mta3 17 83706163 to 83821516 115353 + protein coding gene metastasis associated 3
Cpgi9557 17 83792404 to 83792659 255 CpG island CpG island 9557
Cpgi9558 17 83794947 to 83795631 684 CpG island CpG island 9558
Tssr146004 17 83795364 to 83795383 19 + TSS region transcription start site region 146004
Tssr146005 17 83795395 to 83795402 7 + TSS region transcription start site region 146005
Tssr146006 17 83804293 to 83804317 24 + TSS region transcription start site region 146006
Tssr146007 17 83810647 to 83810665 18 + TSS region transcription start site region 146007
Tssr146008 17 83810760 to 83810775 15 + TSS region transcription start site region 146008
Tssr146009 17 83810909 to 83810930 21 + TSS region transcription start site region 146009
Cpgi9559 17 83812259 to 83812489 230 CpG island CpG island 9559
Gm41637 17 83825525 to 83826627 1102 - lncRNA gene predicted gene, 41637
Tssr146010 17 83827100 to 83827107 7 + TSS region transcription start site region 146010
Haao 17 83831348 to 83847958 16610 - protein coding gene 3-hydroxyanthranilate 3,4-dioxygenase
Tssr149608 17 83831697 to 83831716 19 - TSS region transcription start site region 149608
Tssr149609 17 83831854 to 83831901 47 - TSS region transcription start site region 149609
Tssr149610 17 83837330 to 83837333 3 - TSS region transcription start site region 149610
Gm19260 17 83843766 to 83844107 341 - pseudogene predicted gene, 19260
Tssr146011 17 83846605 to 83846627 22 + TSS region transcription start site region 146011
Cpgi9560 17 83846616 to 83846816 200 CpG island CpG island 9560
Tssr146012 17 83846629 to 83846644 15 + TSS region transcription start site region 146012
Tssr149611 17 83846729 to 83846742 13 - TSS region transcription start site region 149611
Tssr149612 17 83846746 to 83846757 11 - TSS region transcription start site region 149612
Tssr149613 17 83846762 to 83846765 3 - TSS region transcription start site region 149613
Tssr149614 17 83846769 to 83846810 41 - TSS region transcription start site region 149614
Tssr149615 17 83846870 to 83846879 9 - TSS region transcription start site region 149615
Tssr149616 17 83846889 to 83846905 16 - TSS region transcription start site region 149616
Tssr149617 17 83847887 to 83847923 36 - TSS region transcription start site region 149617
Tssr146013 17 83848021 to 83848056 35 + TSS region transcription start site region 146013
C430042M11Rik 17 83851675 to 83854418 2743 - lincRNA gene RIKEN cDNA C430042M11 gene
Tssr146014 17 83856936 to 83856949 13 + TSS region transcription start site region 146014
Cpgi9561 17 83861388 to 83862384 996 CpG island CpG island 9561
n-TIaat17 17 83861944 to 83862036 92 + tRNA gene nuclear encoded tRNA isoleucine 17 (anticodon TAT)
Gm35125 17 83864414 to 83874722 10308 - lncRNA gene predicted gene, 35125
Tssr149618 17 83874683 to 83874707 24 - TSS region transcription start site region 149618
Tssr146015 17 83905648 to 83905656 8 + TSS region transcription start site region 146015
D17Mit75 17 83911825 to 83911973 148 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 75
Tssr146016 17 83917931 to 83917949 18 + TSS region transcription start site region 146016
1810073O08Rik 17 83917937 to 83921606 3669 + lncRNA gene RIKEN cDNA 1810073O08 gene
Gm23905 17 83947588 to 83947696 108 + rRNA gene predicted gene, 23905
Gm41639 17 83950991 to 83952463 1472 - lncRNA gene predicted gene, 41639
Gm35229 17 83956248 to 83957523 1275 + lncRNA gene predicted gene, 35229
Gm41638 17 83959868 to 83960930 1062 - lncRNA gene predicted gene, 41638
Gm35457 17 83963975 to 83970464 6489 + lncRNA gene predicted gene, 35457
Tssr146017 17 83976141 to 83976150 9 + TSS region transcription start site region 146017
Tssr146018 17 83980541 to 83980572 31 + TSS region transcription start site region 146018
Tssr146019 17 83980573 to 83980623 50 + TSS region transcription start site region 146019
Tssr146020 17 83985667 to 83985670 3 + TSS region transcription start site region 146020
Tssr146021 17 83986393 to 83986400 7 + TSS region transcription start site region 146021
Tssr149619 17 83990472 to 83990480 8 - TSS region transcription start site region 149619
Tssr146022 17 83998539 to 83998554 15 + TSS region transcription start site region 146022
8430430B14Rik 17 83998554 to 84013408 14854 + lncRNA gene RIKEN cDNA 8430430B14 gene
Tssr146023 17 84002297 to 84002305 8 + TSS region transcription start site region 146023
Tssr149620 17 84004028 to 84004041 13 - TSS region transcription start site region 149620
Tssr149621 17 84004347 to 84004359 12 - TSS region transcription start site region 149621
Tssr149622 17 84006864 to 84006873 9 - TSS region transcription start site region 149622
Gm37549 17 84012992 to 84017056 4064 - unclassified gene predicted gene, 37549
Gm35551 17 84020663 to 84026019 5356 - lncRNA gene predicted gene, 35551
Tssr149623 17 84025966 to 84026004 38 - TSS region transcription start site region 149623
Cpgi9562 17 84028382 to 84029027 645 CpG island CpG island 9562
Gm49967 17 84036890 to 84038262 1372 + lincRNA gene predicted gene, 49967
Tssr149624 17 84050023 to 84050042 19 - TSS region transcription start site region 149624
Cpgi9563 17 84067095 to 84067442 347 CpG island CpG island 9563
Tssr149625 17 84073752 to 84073765 13 - TSS region transcription start site region 149625
4933433H22Rik 17 84078660 to 84089875 11215 + lncRNA gene RIKEN cDNA 4933433H22 gene
Tssr149626 17 84083582 to 84083614 32 - TSS region transcription start site region 149626
Tssr149627 17 84083645 to 84083658 13 - TSS region transcription start site region 149627
Tssr146024 17 84086611 to 84086621 10 + TSS region transcription start site region 146024
Cpgi9564 17 84096321 to 84097213 892 CpG island CpG island 9564
Tssr146025 17 84100802 to 84100818 16 + TSS region transcription start site region 146025
Tssr146026 17 84100836 to 84100863 27 + TSS region transcription start site region 146026
Tssr149628 17 84103504 to 84103526 22 - TSS region transcription start site region 149628
Tssr146027 17 84103634 to 84103648 14 + TSS region transcription start site region 146027
Tssr149629 17 84106403 to 84106426 23 - TSS region transcription start site region 149629
Tssr146028 17 84108182 to 84108223 41 + TSS region transcription start site region 146028
Tssr149630 17 84115367 to 84115374 7 - TSS region transcription start site region 149630
Tssr146029 17 84116863 to 84116879 16 + TSS region transcription start site region 146029
Tssr5213 17 84117057 to 84117075 18 + TSS region transcription start site region 5213
Tssr5214 17 84117838 to 84117852 14 - TSS region transcription start site region 5214
Tssr149631 17 84119207 to 84119218 11 - TSS region transcription start site region 149631
Tssr146030 17 84119435 to 84119450 15 + TSS region transcription start site region 146030
Tssr146031 17 84119869 to 84119882 13 + TSS region transcription start site region 146031
Tssr146032 17 84119911 to 84119920 9 + TSS region transcription start site region 146032
Tssr149632 17 84121558 to 84121570 12 - TSS region transcription start site region 149632
Tssr149633 17 84121584 to 84121608 24 - TSS region transcription start site region 149633
Tssr146033 17 84125108 to 84125116 8 + TSS region transcription start site region 146033
Tssr149634 17 84125999 to 84126040 41 - TSS region transcription start site region 149634
Tssr149635 17 84126248 to 84126281 33 - TSS region transcription start site region 149635
Tssr149636 17 84126298 to 84126316 18 - TSS region transcription start site region 149636
Tssr146034 17 84126391 to 84126418 27 + TSS region transcription start site region 146034
Tssr149637 17 84127107 to 84127123 16 - TSS region transcription start site region 149637
Tssr149638 17 84128382 to 84128396 14 - TSS region transcription start site region 149638