Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:83784414-83954722

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mta3 17 83706163 to 83821516 115353 + protein coding gene metastasis associated 3
Cpgi9557 17 83792404 to 83792659 255 CpG island CpG island 9557
Cpgi9558 17 83794947 to 83795631 684 CpG island CpG island 9558
Tssr146004 17 83795364 to 83795383 19 + TSS region transcription start site region 146004
Tssr146005 17 83795395 to 83795402 7 + TSS region transcription start site region 146005
Tssr146006 17 83804293 to 83804317 24 + TSS region transcription start site region 146006
Tssr146007 17 83810647 to 83810665 18 + TSS region transcription start site region 146007
Tssr146008 17 83810760 to 83810775 15 + TSS region transcription start site region 146008
Tssr146009 17 83810909 to 83810930 21 + TSS region transcription start site region 146009
Cpgi9559 17 83812259 to 83812489 230 CpG island CpG island 9559
Gm41637 17 83825525 to 83826627 1102 - lncRNA gene predicted gene, 41637
Tssr146010 17 83827100 to 83827107 7 + TSS region transcription start site region 146010
Haao 17 83831348 to 83847958 16610 - protein coding gene 3-hydroxyanthranilate 3,4-dioxygenase
Tssr149608 17 83831697 to 83831716 19 - TSS region transcription start site region 149608
Tssr149609 17 83831854 to 83831901 47 - TSS region transcription start site region 149609
Tssr149610 17 83837330 to 83837333 3 - TSS region transcription start site region 149610
Gm19260 17 83843766 to 83844107 341 - pseudogene predicted gene, 19260
Tssr146011 17 83846605 to 83846627 22 + TSS region transcription start site region 146011
Cpgi9560 17 83846616 to 83846816 200 CpG island CpG island 9560
Tssr146012 17 83846629 to 83846644 15 + TSS region transcription start site region 146012
Tssr149611 17 83846729 to 83846742 13 - TSS region transcription start site region 149611
Tssr149612 17 83846746 to 83846757 11 - TSS region transcription start site region 149612
Tssr149613 17 83846762 to 83846765 3 - TSS region transcription start site region 149613
Tssr149614 17 83846769 to 83846810 41 - TSS region transcription start site region 149614
Tssr149615 17 83846870 to 83846879 9 - TSS region transcription start site region 149615
Tssr149616 17 83846889 to 83846905 16 - TSS region transcription start site region 149616
Tssr149617 17 83847887 to 83847923 36 - TSS region transcription start site region 149617
Tssr146013 17 83848021 to 83848056 35 + TSS region transcription start site region 146013
C430042M11Rik 17 83851675 to 83854418 2743 - lincRNA gene RIKEN cDNA C430042M11 gene
Tssr146014 17 83856936 to 83856949 13 + TSS region transcription start site region 146014
Cpgi9561 17 83861388 to 83862384 996 CpG island CpG island 9561
n-TIaat17 17 83861944 to 83862036 92 + tRNA gene nuclear encoded tRNA isoleucine 17 (anticodon TAT)
Gm35125 17 83864414 to 83874722 10308 - lncRNA gene predicted gene, 35125
Tssr149618 17 83874683 to 83874707 24 - TSS region transcription start site region 149618
Tssr146015 17 83905648 to 83905656 8 + TSS region transcription start site region 146015
D17Mit75 17 83911825 to 83911973 148 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 75
Tssr146016 17 83917931 to 83917949 18 + TSS region transcription start site region 146016
1810073O08Rik 17 83917937 to 83921606 3669 + lncRNA gene RIKEN cDNA 1810073O08 gene
Gm23905 17 83947588 to 83947696 108 + rRNA gene predicted gene, 23905
Gm41639 17 83950991 to 83952463 1472 - lncRNA gene predicted gene, 41639