Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:8359423-8517496

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49987 17 8311109 to 8396852 85743 + unclassified gene predicted gene, 49987
Gm46593 17 8362107 to 8362445 338 - pseudogene predicted gene, 46593
T2 17 8372010 to 8422728 50718 + protein coding gene brachyury 2
Tssr5001 17 8372074 to 8372097 23 + TSS region transcription start site region 5001
Gm16702 17 8379045 to 8389468 10423 - lincRNA gene predicted gene, 16702
Gm5491 17 8384053 to 8384660 607 - pseudogene predicted gene 5491
Cpgi8589 17 8389026 to 8389433 407 CpG island CpG island 8589
Cpgi8590 17 8396784 to 8396985 201 CpG island CpG island 8590
Gm34036 17 8411619 to 8415211 3592 - lncRNA gene predicted gene, 34036
Cpgi8591 17 8429656 to 8429834 178 CpG island CpG island 8591
Cpgi8592 17 8433279 to 8435355 2076 CpG island CpG island 8592
Tssr142539 17 8434265 to 8434283 18 + TSS region transcription start site region 142539
T 17 8434423 to 8442496 8073 + protein coding gene brachyury, T-box transcription factor T
D17Mit143 17 8443121 to 8443244 123 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 143
Obq19 17 8443121 to 8443244 123 QTL obesity QTL 19
D17Mit143.2 17 8443228 to 8443342 114 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 143.2
D17Mit246 17 8459684 to 8459785 101 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 246
Tssr142540 17 8500464 to 8500480 16 + TSS region transcription start site region 142540
Cpgi8593 17 8506018 to 8506303 285 CpG island CpG island 8593
Tssr5002 17 8506335 to 8506353 18 + TSS region transcription start site region 5002
Cpgi8594 17 8513475 to 8513712 237 CpG island CpG island 8594