Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:81695897-83125900

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stheal11 17 12067324 to 83054339 70987015 QTL soft tissue heal 11
Slc8a1 17 81373105 to 81738377 365272 - protein coding gene solute carrier family 8 (sodium/calcium exchanger), member 1
Tssr149567 17 81697686 to 81697690 4 - TSS region transcription start site region 149567
Gm34131 17 81704105 to 81742507 38402 + lncRNA gene predicted gene, 34131
Tssr149568 17 81704782 to 81704810 28 - TSS region transcription start site region 149568
Tssr149569 17 81704874 to 81704899 25 - TSS region transcription start site region 149569
Tssr145980 17 81705120 to 81705146 26 + TSS region transcription start site region 145980
Tssr149570 17 81707599 to 81707600 1 - TSS region transcription start site region 149570
Tssr149571 17 81712907 to 81712913 6 - TSS region transcription start site region 149571
Tssr149572 17 81713026 to 81713037 11 - TSS region transcription start site region 149572
Tssr149573 17 81725591 to 81725595 4 - TSS region transcription start site region 149573
Tssr149574 17 81730885 to 81730892 7 - TSS region transcription start site region 149574
Tssr149575 17 81730905 to 81730923 18 - TSS region transcription start site region 149575
Tssr149576 17 81730925 to 81730943 18 - TSS region transcription start site region 149576
Tssr149577 17 81730986 to 81730995 9 - TSS region transcription start site region 149577
Tssr149578 17 81731115 to 81731126 11 - TSS region transcription start site region 149578
Tssr149579 17 81731249 to 81731261 12 - TSS region transcription start site region 149579
Tssr149580 17 81731275 to 81731284 9 - TSS region transcription start site region 149580
Tssr149581 17 81731431 to 81731440 9 - TSS region transcription start site region 149581
Tssr149582 17 81731515 to 81731527 12 - TSS region transcription start site region 149582
Tssr149583 17 81732972 to 81732975 3 - TSS region transcription start site region 149583
Tssr149584 17 81738355 to 81738366 11 - TSS region transcription start site region 149584
Tssr149585 17 81738371 to 81738400 29 - TSS region transcription start site region 149585
Tssr5211 17 81738416 to 81738462 46 - TSS region transcription start site region 5211
Tssr149586 17 81789362 to 81789367 5 - TSS region transcription start site region 149586
Rpl31-ps25 17 81791555 to 81791933 378 - pseudogene ribosomal protein L31. pseudogene 25
Tssr149587 17 81838414 to 81838442 28 - TSS region transcription start site region 149587
Tssr149588 17 81838491 to 81838522 31 - TSS region transcription start site region 149588
Ffal1 17 81907509 to 81907644 135 QTL free fatty acid level 1
D17Mit132 17 81907509 to 81907644 135 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 132
D17Mit188 17 81953920 to 81954040 120 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 188
Gm4599 17 81955451 to 81956273 822 - pseudogene predicted gene 4599
D17Mit209 17 82134690 to 82134814 124 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 209
Gm50045 17 82191968 to 82192609 641 - pseudogene predicted gene, 50045
Gm27359 17 82193755 to 82193864 109 + miRNA gene predicted gene, 27359
Gm22386 17 82232144 to 82232272 128 - snoRNA gene predicted gene, 22386
Gm23400 17 82235877 to 82235978 101 + miRNA gene predicted gene, 23400
Gm9390 17 82355393 to 82356084 691 + pseudogene predicted gene 9390
D17Ertd589e 17 82367159 to 82367370 211 DNA segment DNA segment, Chr 17, ERATO Doi 589, expressed
Rpsa-ps7 17 82409935 to 82410819 884 - pseudogene ribosomal protein SA, pseudogene 7
Tssr149589 17 82410897 to 82410900 3 - TSS region transcription start site region 149589
Tssr5212 17 82539157 to 82539171 14 + TSS region transcription start site region 5212
Gm6594 17 82539260 to 82539545 285 + pseudogene predicted pseudogene 6594
Gm34211 17 82616224 to 82620486 4262 - lncRNA gene predicted gene, 34211
Gm34265 17 82773502 to 82956548 183046 - lncRNA gene predicted gene, 34265
Gm41629 17 82871836 to 82903860 32024 + lncRNA gene predicted gene, 41629
Tssr149590 17 82941032 to 82941037 5 - TSS region transcription start site region 149590
Gm4601 17 82955996 to 82956965 969 + lncRNA gene predicted gene 4601
Cpgi9546 17 82956119 to 82956538 419 CpG island CpG island 9546
Tssr149591 17 82956331 to 82956383 52 - TSS region transcription start site region 149591
Cpgi9547 17 83023640 to 83023827 187 CpG island CpG island 9547
Gm19689 17 83033592 to 83078225 44633 - lncRNA gene predicted gene, 19689
Cpgi9548 17 83042783 to 83043904 1121 CpG island CpG island 9548
D17Mit122 17 83054193 to 83054339 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 122
Tssr149592 17 83057970 to 83057981 11 - TSS region transcription start site region 149592
Gm29052 17 83068905 to 83070632 1727 + lincRNA gene predicted gene 29052
Gm46606 17 83098018 to 83115793 17775 - lncRNA gene predicted gene, 46606