Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:81493416-81983462

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc8a1 17 81373105 to 81738377 365272 - protein coding gene solute carrier family 8 (sodium/calcium exchanger), member 1
Tssr149532 17 81493445 to 81493457 12 - TSS region transcription start site region 149532
Tssr149533 17 81498497 to 81498509 12 - TSS region transcription start site region 149533
Tssr149534 17 81498763 to 81498811 48 - TSS region transcription start site region 149534
Tssr149535 17 81499060 to 81499065 5 - TSS region transcription start site region 149535
D17Mit243 17 81507422 to 81507517 95 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 243
Tssr149536 17 81512909 to 81512923 14 - TSS region transcription start site region 149536
Tssr149537 17 81512931 to 81512945 14 - TSS region transcription start site region 149537
Tssr149538 17 81513058 to 81513071 13 - TSS region transcription start site region 149538
Tssr149539 17 81513093 to 81513105 12 - TSS region transcription start site region 149539
Tssr149540 17 81520183 to 81520187 4 - TSS region transcription start site region 149540
Tssr149541 17 81520520 to 81520558 38 - TSS region transcription start site region 149541
Tssr149542 17 81561953 to 81561959 6 - TSS region transcription start site region 149542
Tssr149543 17 81568701 to 81568706 5 - TSS region transcription start site region 149543
Tssr149544 17 81580625 to 81580627 2 - TSS region transcription start site region 149544
Tssr149545 17 81582136 to 81582153 17 - TSS region transcription start site region 149545
Tssr149546 17 81582166 to 81582184 18 - TSS region transcription start site region 149546
Tssr149547 17 81582237 to 81582251 14 - TSS region transcription start site region 149547
Tssr149548 17 81582635 to 81582646 11 - TSS region transcription start site region 149548
Tssr149549 17 81598272 to 81598280 8 - TSS region transcription start site region 149549
Tssr149550 17 81601215 to 81601219 4 - TSS region transcription start site region 149550
D330045E12Rik 17 81604173 to 81606155 1982 unclassified gene RIKEN cDNA D330045E12 gene
Tssr149551 17 81604267 to 81604286 19 - TSS region transcription start site region 149551
Tssr149552 17 81606122 to 81606126 4 - TSS region transcription start site region 149552
Tssr149553 17 81620462 to 81620466 4 - TSS region transcription start site region 149553
Tssr149554 17 81622462 to 81622465 3 - TSS region transcription start site region 149554
Tssr149555 17 81625150 to 81625153 3 - TSS region transcription start site region 149555
Tssr149556 17 81627735 to 81627756 21 - TSS region transcription start site region 149556
Tssr149557 17 81627877 to 81627888 11 - TSS region transcription start site region 149557
Tssr149558 17 81627897 to 81627925 28 - TSS region transcription start site region 149558
Tssr149559 17 81629024 to 81629028 4 - TSS region transcription start site region 149559
Tssr149560 17 81629352 to 81629357 5 - TSS region transcription start site region 149560
Tssr149561 17 81647854 to 81647865 11 - TSS region transcription start site region 149561
Tssr149562 17 81648846 to 81648857 11 - TSS region transcription start site region 149562
Cpgi9545 17 81669459 to 81670754 1295 CpG island CpG island 9545
Tssr149563 17 81670123 to 81670134 11 - TSS region transcription start site region 149563
Tssr149564 17 81670145 to 81670158 13 - TSS region transcription start site region 149564
Tssr149565 17 81670161 to 81670261 100 - TSS region transcription start site region 149565
Tssr149566 17 81671658 to 81671672 14 - TSS region transcription start site region 149566
9530032E18Rik 17 81682170 to 81682982 812 unclassified gene RIKEN cDNA 9530032E18 gene
Tssr149567 17 81697686 to 81697690 4 - TSS region transcription start site region 149567
Gm34131 17 81704105 to 81742507 38402 + lncRNA gene predicted gene, 34131
Tssr149568 17 81704782 to 81704810 28 - TSS region transcription start site region 149568
Tssr149569 17 81704874 to 81704899 25 - TSS region transcription start site region 149569
Tssr145980 17 81705120 to 81705146 26 + TSS region transcription start site region 145980
Tssr149570 17 81707599 to 81707600 1 - TSS region transcription start site region 149570
Tssr149571 17 81712907 to 81712913 6 - TSS region transcription start site region 149571
Tssr149572 17 81713026 to 81713037 11 - TSS region transcription start site region 149572
Tssr149573 17 81725591 to 81725595 4 - TSS region transcription start site region 149573
Tssr149574 17 81730885 to 81730892 7 - TSS region transcription start site region 149574
Tssr149575 17 81730905 to 81730923 18 - TSS region transcription start site region 149575
Tssr149576 17 81730925 to 81730943 18 - TSS region transcription start site region 149576
Tssr149577 17 81730986 to 81730995 9 - TSS region transcription start site region 149577
Tssr149578 17 81731115 to 81731126 11 - TSS region transcription start site region 149578
Tssr149579 17 81731249 to 81731261 12 - TSS region transcription start site region 149579
Tssr149580 17 81731275 to 81731284 9 - TSS region transcription start site region 149580
Tssr149581 17 81731431 to 81731440 9 - TSS region transcription start site region 149581
Tssr149582 17 81731515 to 81731527 12 - TSS region transcription start site region 149582
Tssr149583 17 81732972 to 81732975 3 - TSS region transcription start site region 149583
Tssr149584 17 81738355 to 81738366 11 - TSS region transcription start site region 149584
Tssr149585 17 81738371 to 81738400 29 - TSS region transcription start site region 149585
Tssr5211 17 81738416 to 81738462 46 - TSS region transcription start site region 5211
Tssr149586 17 81789362 to 81789367 5 - TSS region transcription start site region 149586
Rpl31-ps25 17 81791555 to 81791933 378 - pseudogene ribosomal protein L31. pseudogene 25
Tssr149587 17 81838414 to 81838442 28 - TSS region transcription start site region 149587
Tssr149588 17 81838491 to 81838522 31 - TSS region transcription start site region 149588
Ffal1 17 81907509 to 81907644 135 QTL free fatty acid level 1
D17Mit132 17 81907509 to 81907644 135 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 132
D17Mit188 17 81953920 to 81954040 120 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 188
Gm4599 17 81955451 to 81956273 822 - pseudogene predicted gene 4599