Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:81041763-81841923

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99 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Thumpd2 17 81026332 to 81065082 38750 - protein coding gene THUMP domain containing 2
Tssr145979 17 81046981 to 81046996 15 + TSS region transcription start site region 145979
Cpgi9544 17 81064786 to 81065268 482 CpG island CpG island 9544
Tssr149512 17 81065056 to 81065099 43 - TSS region transcription start site region 149512
D17Mit1008 17 81228217 to 81228388 171 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 1008
Gm50042 17 81246360 to 81246738 378 - pseudogene predicted gene, 50042
Gm33944 17 81284954 to 81317615 32661 + lncRNA gene predicted gene, 33944
Gm50043 17 81297300 to 81297744 444 - pseudogene predicted gene, 50043
Gm34070 17 81335857 to 81353337 17480 + lncRNA gene predicted gene, 34070
Gm41627 17 81354217 to 81359061 4844 + lncRNA gene predicted gene, 41627
Gm50044 17 81370833 to 81376294 5461 + antisense lncRNA gene predicted gene, 50044
Slc8a1 17 81373105 to 81738377 365272 - protein coding gene solute carrier family 8 (sodium/calcium exchanger), member 1
Tssr149513 17 81375434 to 81375446 12 - TSS region transcription start site region 149513
Tssr149514 17 81375452 to 81375464 12 - TSS region transcription start site region 149514
Tssr5210 17 81375483 to 81375498 15 - TSS region transcription start site region 5210
Tssr149515 17 81375521 to 81375534 13 - TSS region transcription start site region 149515
Tssr149516 17 81375884 to 81375901 17 - TSS region transcription start site region 149516
Tssr149517 17 81375984 to 81375999 15 - TSS region transcription start site region 149517
Tssr149518 17 81376084 to 81376094 10 - TSS region transcription start site region 149518
Tssr149519 17 81378918 to 81378936 18 - TSS region transcription start site region 149519
Tssr149520 17 81378942 to 81378954 12 - TSS region transcription start site region 149520
Tssr149521 17 81379046 to 81379060 14 - TSS region transcription start site region 149521
Tssr149522 17 81379108 to 81379122 14 - TSS region transcription start site region 149522
Tssr149523 17 81380645 to 81380676 31 - TSS region transcription start site region 149523
Tssr149524 17 81385435 to 81385440 5 - TSS region transcription start site region 149524
Tssr149525 17 81388273 to 81388276 3 - TSS region transcription start site region 149525
Tssr149526 17 81388326 to 81388341 15 - TSS region transcription start site region 149526
Tssr149527 17 81419859 to 81419863 4 - TSS region transcription start site region 149527
2900042E19Rik 17 81438505 to 81439855 1350 unclassified gene RIKEN cDNA 2900042E19 gene
Gm11096 17 81441763 to 81441923 160 + protein coding gene predicted gene 11096
Tssr149528 17 81465635 to 81465638 3 - TSS region transcription start site region 149528
Tssr149529 17 81471282 to 81471294 12 - TSS region transcription start site region 149529
Tssr149530 17 81473543 to 81473552 9 - TSS region transcription start site region 149530
Tssr149531 17 81481490 to 81481495 5 - TSS region transcription start site region 149531
Tssr149532 17 81493445 to 81493457 12 - TSS region transcription start site region 149532
Tssr149533 17 81498497 to 81498509 12 - TSS region transcription start site region 149533
Tssr149534 17 81498763 to 81498811 48 - TSS region transcription start site region 149534
Tssr149535 17 81499060 to 81499065 5 - TSS region transcription start site region 149535
D17Mit243 17 81507422 to 81507517 95 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 243
Tssr149536 17 81512909 to 81512923 14 - TSS region transcription start site region 149536
Tssr149537 17 81512931 to 81512945 14 - TSS region transcription start site region 149537
Tssr149538 17 81513058 to 81513071 13 - TSS region transcription start site region 149538
Tssr149539 17 81513093 to 81513105 12 - TSS region transcription start site region 149539
Tssr149540 17 81520183 to 81520187 4 - TSS region transcription start site region 149540
Tssr149541 17 81520520 to 81520558 38 - TSS region transcription start site region 149541
Tssr149542 17 81561953 to 81561959 6 - TSS region transcription start site region 149542
Tssr149543 17 81568701 to 81568706 5 - TSS region transcription start site region 149543
Tssr149544 17 81580625 to 81580627 2 - TSS region transcription start site region 149544
Tssr149545 17 81582136 to 81582153 17 - TSS region transcription start site region 149545
Tssr149546 17 81582166 to 81582184 18 - TSS region transcription start site region 149546
Tssr149547 17 81582237 to 81582251 14 - TSS region transcription start site region 149547
Tssr149548 17 81582635 to 81582646 11 - TSS region transcription start site region 149548
Tssr149549 17 81598272 to 81598280 8 - TSS region transcription start site region 149549
Tssr149550 17 81601215 to 81601219 4 - TSS region transcription start site region 149550
D330045E12Rik 17 81604173 to 81606155 1982 unclassified gene RIKEN cDNA D330045E12 gene
Tssr149551 17 81604267 to 81604286 19 - TSS region transcription start site region 149551
Tssr149552 17 81606122 to 81606126 4 - TSS region transcription start site region 149552
Tssr149553 17 81620462 to 81620466 4 - TSS region transcription start site region 149553
Tssr149554 17 81622462 to 81622465 3 - TSS region transcription start site region 149554
Tssr149555 17 81625150 to 81625153 3 - TSS region transcription start site region 149555
Tssr149556 17 81627735 to 81627756 21 - TSS region transcription start site region 149556
Tssr149557 17 81627877 to 81627888 11 - TSS region transcription start site region 149557
Tssr149558 17 81627897 to 81627925 28 - TSS region transcription start site region 149558
Tssr149559 17 81629024 to 81629028 4 - TSS region transcription start site region 149559
Tssr149560 17 81629352 to 81629357 5 - TSS region transcription start site region 149560
Tssr149561 17 81647854 to 81647865 11 - TSS region transcription start site region 149561
Tssr149562 17 81648846 to 81648857 11 - TSS region transcription start site region 149562
Cpgi9545 17 81669459 to 81670754 1295 CpG island CpG island 9545
Tssr149563 17 81670123 to 81670134 11 - TSS region transcription start site region 149563
Tssr149564 17 81670145 to 81670158 13 - TSS region transcription start site region 149564
Tssr149565 17 81670161 to 81670261 100 - TSS region transcription start site region 149565
Tssr149566 17 81671658 to 81671672 14 - TSS region transcription start site region 149566
9530032E18Rik 17 81682170 to 81682982 812 unclassified gene RIKEN cDNA 9530032E18 gene
Tssr149567 17 81697686 to 81697690 4 - TSS region transcription start site region 149567
Gm34131 17 81704105 to 81742507 38402 + lncRNA gene predicted gene, 34131
Tssr149568 17 81704782 to 81704810 28 - TSS region transcription start site region 149568
Tssr149569 17 81704874 to 81704899 25 - TSS region transcription start site region 149569
Tssr145980 17 81705120 to 81705146 26 + TSS region transcription start site region 145980
Tssr149570 17 81707599 to 81707600 1 - TSS region transcription start site region 149570
Tssr149571 17 81712907 to 81712913 6 - TSS region transcription start site region 149571
Tssr149572 17 81713026 to 81713037 11 - TSS region transcription start site region 149572
Tssr149573 17 81725591 to 81725595 4 - TSS region transcription start site region 149573
Tssr149574 17 81730885 to 81730892 7 - TSS region transcription start site region 149574
Tssr149575 17 81730905 to 81730923 18 - TSS region transcription start site region 149575
Tssr149576 17 81730925 to 81730943 18 - TSS region transcription start site region 149576
Tssr149577 17 81730986 to 81730995 9 - TSS region transcription start site region 149577
Tssr149578 17 81731115 to 81731126 11 - TSS region transcription start site region 149578
Tssr149579 17 81731249 to 81731261 12 - TSS region transcription start site region 149579
Tssr149580 17 81731275 to 81731284 9 - TSS region transcription start site region 149580
Tssr149581 17 81731431 to 81731440 9 - TSS region transcription start site region 149581
Tssr149582 17 81731515 to 81731527 12 - TSS region transcription start site region 149582
Tssr149583 17 81732972 to 81732975 3 - TSS region transcription start site region 149583
Tssr149584 17 81738355 to 81738366 11 - TSS region transcription start site region 149584
Tssr149585 17 81738371 to 81738400 29 - TSS region transcription start site region 149585
Tssr5211 17 81738416 to 81738462 46 - TSS region transcription start site region 5211
Tssr149586 17 81789362 to 81789367 5 - TSS region transcription start site region 149586
Rpl31-ps25 17 81791555 to 81791933 378 - pseudogene ribosomal protein L31. pseudogene 25
Tssr149587 17 81838414 to 81838442 28 - TSS region transcription start site region 149587
Tssr149588 17 81838491 to 81838522 31 - TSS region transcription start site region 149588