Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:80933217-81523388

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr149510 17 80933479 to 80933497 18 - TSS region transcription start site region 149510
Tssr149511 17 80933822 to 80933831 9 - TSS region transcription start site region 149511
Gm9386 17 80938346 to 80938714 368 - pseudogene predicted pseudogene 9386
Tssr145973 17 80943826 to 80943857 31 + TSS region transcription start site region 145973
Tssr145974 17 80943981 to 80944004 23 + TSS region transcription start site region 145974
Cpgi9543 17 80944118 to 80945248 1130 CpG island CpG island 9543
Tssr145975 17 80944611 to 80944644 33 + TSS region transcription start site region 145975
Tmem178 17 80944632 to 81001816 57184 + protein coding gene transmembrane protein 178
Tssr145976 17 80944650 to 80944671 21 + TSS region transcription start site region 145976
D17Mit258 17 80946564 to 80946677 113 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 258
Tssr145977 17 80996093 to 80996097 4 + TSS region transcription start site region 145977
Tssr145978 17 80997895 to 80997899 4 + TSS region transcription start site region 145978
Thumpd2 17 81026332 to 81065082 38750 - protein coding gene THUMP domain containing 2
Tssr145979 17 81046981 to 81046996 15 + TSS region transcription start site region 145979
Cpgi9544 17 81064786 to 81065268 482 CpG island CpG island 9544
Tssr149512 17 81065056 to 81065099 43 - TSS region transcription start site region 149512
D17Mit1008 17 81228217 to 81228388 171 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 1008
Gm50042 17 81246360 to 81246738 378 - pseudogene predicted gene, 50042
Gm33944 17 81284954 to 81317615 32661 + lncRNA gene predicted gene, 33944
Gm50043 17 81297300 to 81297744 444 - pseudogene predicted gene, 50043
Gm34070 17 81335857 to 81353337 17480 + lncRNA gene predicted gene, 34070
Gm41627 17 81354217 to 81359061 4844 + lncRNA gene predicted gene, 41627
Gm50044 17 81370833 to 81376294 5461 + antisense lncRNA gene predicted gene, 50044
Slc8a1 17 81373105 to 81738377 365272 - protein coding gene solute carrier family 8 (sodium/calcium exchanger), member 1
Tssr149513 17 81375434 to 81375446 12 - TSS region transcription start site region 149513
Tssr149514 17 81375452 to 81375464 12 - TSS region transcription start site region 149514
Tssr5210 17 81375483 to 81375498 15 - TSS region transcription start site region 5210
Tssr149515 17 81375521 to 81375534 13 - TSS region transcription start site region 149515
Tssr149516 17 81375884 to 81375901 17 - TSS region transcription start site region 149516
Tssr149517 17 81375984 to 81375999 15 - TSS region transcription start site region 149517
Tssr149518 17 81376084 to 81376094 10 - TSS region transcription start site region 149518
Tssr149519 17 81378918 to 81378936 18 - TSS region transcription start site region 149519
Tssr149520 17 81378942 to 81378954 12 - TSS region transcription start site region 149520
Tssr149521 17 81379046 to 81379060 14 - TSS region transcription start site region 149521
Tssr149522 17 81379108 to 81379122 14 - TSS region transcription start site region 149522
Tssr149523 17 81380645 to 81380676 31 - TSS region transcription start site region 149523
Tssr149524 17 81385435 to 81385440 5 - TSS region transcription start site region 149524
Tssr149525 17 81388273 to 81388276 3 - TSS region transcription start site region 149525
Tssr149526 17 81388326 to 81388341 15 - TSS region transcription start site region 149526
Tssr149527 17 81419859 to 81419863 4 - TSS region transcription start site region 149527
2900042E19Rik 17 81438505 to 81439855 1350 unclassified gene RIKEN cDNA 2900042E19 gene
Gm11096 17 81441763 to 81441923 160 + protein coding gene predicted gene 11096
Tssr149528 17 81465635 to 81465638 3 - TSS region transcription start site region 149528
Tssr149529 17 81471282 to 81471294 12 - TSS region transcription start site region 149529
Tssr149530 17 81473543 to 81473552 9 - TSS region transcription start site region 149530
Tssr149531 17 81481490 to 81481495 5 - TSS region transcription start site region 149531
Tssr149532 17 81493445 to 81493457 12 - TSS region transcription start site region 149532
Tssr149533 17 81498497 to 81498509 12 - TSS region transcription start site region 149533
Tssr149534 17 81498763 to 81498811 48 - TSS region transcription start site region 149534
Tssr149535 17 81499060 to 81499065 5 - TSS region transcription start site region 149535
D17Mit243 17 81507422 to 81507517 95 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 243
Tssr149536 17 81512909 to 81512923 14 - TSS region transcription start site region 149536
Tssr149537 17 81512931 to 81512945 14 - TSS region transcription start site region 149537
Tssr149538 17 81513058 to 81513071 13 - TSS region transcription start site region 149538
Tssr149539 17 81513093 to 81513105 12 - TSS region transcription start site region 149539
Tssr149540 17 81520183 to 81520187 4 - TSS region transcription start site region 149540
Tssr149541 17 81520520 to 81520558 38 - TSS region transcription start site region 149541