MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:80609965-80810195

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Map4k3	17	80580513 to 80728205	147692	-	protein coding gene	mitogen-activated protein kinase kinase kinase kinase 3
Tssr149500	17	80641242 to 80641243	1	-	TSS region	transcription start site region 149500
Tssr149501	17	80670943 to 80670953	10	-	TSS region	transcription start site region 149501
Tssr149502	17	80680045 to 80680054	9	-	TSS region	transcription start site region 149502
Tssr149503	17	80700751 to 80700779	28	-	TSS region	transcription start site region 149503
Tssr149504	17	80702007 to 80702020	13	-	TSS region	transcription start site region 149504
Cpgi9541	17	80709965 to 80710195	230		CpG island	CpG island 9541
Tssr149505	17	80726610 to 80726615	5	-	TSS region	transcription start site region 149505
Cpgi9542	17	80727373 to 80728790	1417		CpG island	CpG island 9542
Tssr149506	17	80727996 to 80728019	23	-	TSS region	transcription start site region 149506
Tssr149507	17	80728026 to 80728061	35	-	TSS region	transcription start site region 149507
Tssr149508	17	80728130 to 80728171	41	-	TSS region	transcription start site region 149508
Gm9959	17	80728131 to 80728522	391	+	pseudogene	predicted gene 9959
Tssr145969	17	80762844 to 80762857	13	+	TSS region	transcription start site region 145969
Tssr145970	17	80762893 to 80762904	11	+	TSS region	transcription start site region 145970
Gm33538	17	80783791 to 80785261	1470	-	lncRNA gene	predicted gene, 33538
Tssr149509	17	80801007 to 80801043	36	-	TSS region	transcription start site region 149509
Gm33596	17	80807231 to 80809434	2203	-	lncRNA gene	predicted gene, 33596