Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:80553026-80903061

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Obrq15 17 57227447 to 80578347 23350900 QTL obesity resistance QTL 15
Cdkl4 17 80523550 to 80577813 54263 - protein coding gene cyclin-dependent kinase-like 4
Gm33373 17 80553464 to 80563942 10478 + lncRNA gene predicted gene, 33373
Cpgi9539 17 80553647 to 80554091 444 CpG island CpG island 9539
F420015M19Rik 17 80564011 to 80568111 4100 + protein coding gene RIKEN cDNA F420015M19 gene
Tssr149494 17 80564712 to 80564717 5 - TSS region transcription start site region 149494
Cpgi9540 17 80576966 to 80577622 656 CpG island CpG island 9540
Tssr149495 17 80577392 to 80577403 11 - TSS region transcription start site region 149495
Tssr149496 17 80577410 to 80577439 29 - TSS region transcription start site region 149496
Tssr149497 17 80577743 to 80577752 9 - TSS region transcription start site region 149497
Tssr149498 17 80577768 to 80577783 15 - TSS region transcription start site region 149498
Aliq3 17 80578119 to 80578347 228 QTL acute lung injury QTL 3
D17Mit2 17 80578119 to 80578347 228 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 2
Map4k3 17 80580513 to 80728205 147692 - protein coding gene mitogen-activated protein kinase kinase kinase kinase 3
Tssr149499 17 80598447 to 80598453 6 - TSS region transcription start site region 149499
Tssr149500 17 80641242 to 80641243 1 - TSS region transcription start site region 149500
Tssr149501 17 80670943 to 80670953 10 - TSS region transcription start site region 149501
Tssr149502 17 80680045 to 80680054 9 - TSS region transcription start site region 149502
Tssr149503 17 80700751 to 80700779 28 - TSS region transcription start site region 149503
Tssr149504 17 80702007 to 80702020 13 - TSS region transcription start site region 149504
Cpgi9541 17 80709965 to 80710195 230 CpG island CpG island 9541
Tssr149505 17 80726610 to 80726615 5 - TSS region transcription start site region 149505
Cpgi9542 17 80727373 to 80728790 1417 CpG island CpG island 9542
Tssr149506 17 80727996 to 80728019 23 - TSS region transcription start site region 149506
Tssr149507 17 80728026 to 80728061 35 - TSS region transcription start site region 149507
Tssr149508 17 80728130 to 80728171 41 - TSS region transcription start site region 149508
Gm9959 17 80728131 to 80728522 391 + pseudogene predicted gene 9959
Tssr145969 17 80762844 to 80762857 13 + TSS region transcription start site region 145969
Tssr145970 17 80762893 to 80762904 11 + TSS region transcription start site region 145970
Gm33538 17 80783791 to 80785261 1470 - lncRNA gene predicted gene, 33538
Tssr149509 17 80801007 to 80801043 36 - TSS region transcription start site region 149509
Gm33596 17 80807231 to 80809434 2203 - lncRNA gene predicted gene, 33596
C230072F16Rik 17 80896793 to 80933045 36252 + lincRNA gene RIKEN cDNA C230072F16 gene
Tssr145971 17 80896812 to 80896841 29 + TSS region transcription start site region 145971
Tssr145972 17 80896843 to 80896854 11 + TSS region transcription start site region 145972