Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:80395435-80565462

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgef33 17 80307407 to 80400081 92674 + protein coding gene Rho guanine nucleotide exchange factor (GEF) 33
Sos1 17 80393752 to 80480453 86701 - protein coding gene SOS Ras/Rac guanine nucleotide exchange factor 1
Tssr149488 17 80424777 to 80424781 4 - TSS region transcription start site region 149488
Gm18141 17 80444627 to 80445192 565 + pseudogene predicted gene, 18141
Tssr149489 17 80450631 to 80450641 10 - TSS region transcription start site region 149489
Gm18650 17 80463104 to 80463873 769 + pseudogene predicted gene, 18650
D17Mit128 17 80472654 to 80472799 145 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 128
D17Mit128.3 17 80472775 to 80472884 109 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 128.3
Cpgi9535 17 80479291 to 80480728 1437 CpG island CpG island 9535
Tssr145968 17 80479390 to 80479434 44 + TSS region transcription start site region 145968
Tssr149490 17 80480414 to 80480434 20 - TSS region transcription start site region 149490
Tssr149491 17 80480435 to 80480462 27 - TSS region transcription start site region 149491
Tssr149492 17 80480463 to 80480474 11 - TSS region transcription start site region 149492
Tssr149493 17 80480478 to 80480487 9 - TSS region transcription start site region 149493
Cpgi9536 17 80482787 to 80483361 574 CpG island CpG island 9536
Cdkl4 17 80523550 to 80577813 54263 - protein coding gene cyclin-dependent kinase-like 4
Cpgi9537 17 80543543 to 80543813 270 CpG island CpG island 9537
Cpgi9538 17 80550276 to 80550528 252 CpG island CpG island 9538
Gm33373 17 80553464 to 80563942 10478 + lncRNA gene predicted gene, 33373
Cpgi9539 17 80553647 to 80554091 444 CpG island CpG island 9539
F420015M19Rik 17 80564011 to 80568111 4100 + protein coding gene RIKEN cDNA F420015M19 gene
Tssr149494 17 80564712 to 80564717 5 - TSS region transcription start site region 149494