Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:80162383-80452394

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Galm 17 80127457 to 80185032 57575 + protein coding gene galactose mutarotase
Tssr149481 17 80173808 to 80173815 7 - TSS region transcription start site region 149481
Tssr145951 17 80184017 to 80184026 9 + TSS region transcription start site region 145951
Gm25706 17 80196158 to 80196404 246 - unclassified non-coding RNA gene predicted gene, 25706
Srsf7 17 80200080 to 80207307 7227 - protein coding gene serine/arginine-rich splicing factor 7
Cpgi9530 17 80206195 to 80207657 1462 CpG island CpG island 9530
Tssr149482 17 80207299 to 80207308 9 - TSS region transcription start site region 149482
Tssr145952 17 80207466 to 80207517 51 + TSS region transcription start site region 145952
Tssr145953 17 80207521 to 80207543 22 + TSS region transcription start site region 145953
Ttc39d 17 80215914 to 80217936 2022 + protein coding gene tetratricopeptide repeat domain 39D
Cpgi9531 17 80224399 to 80224716 317 CpG island CpG island 9531
Gemin6 17 80224441 to 80228497 4056 + protein coding gene gem nuclear organelle associated protein 6
Tssr145954 17 80224447 to 80224493 46 + TSS region transcription start site region 145954
Tssr145955 17 80224495 to 80224510 15 + TSS region transcription start site region 145955
Tssr145956 17 80224516 to 80224525 9 + TSS region transcription start site region 145956
Tssr145957 17 80224533 to 80224550 17 + TSS region transcription start site region 145957
Tssr145958 17 80232744 to 80232748 4 + TSS region transcription start site region 145958
Dhx57 17 80238309 to 80290476 52167 - protein coding gene DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
Gm50087 17 80247102 to 80250685 3583 + antisense lncRNA gene predicted gene, 50087
Tssr149483 17 80253286 to 80253291 5 - TSS region transcription start site region 149483
Tssr145959 17 80254694 to 80254706 12 + TSS region transcription start site region 145959
Tssr149484 17 80260463 to 80260466 3 - TSS region transcription start site region 149484
Cpgi9532 17 80289791 to 80290518 727 CpG island CpG island 9532
Tssr149485 17 80289804 to 80289820 16 - TSS region transcription start site region 149485
Tssr149486 17 80290066 to 80290183 117 - TSS region transcription start site region 149486
Morn2 17 80290203 to 80297476 7273 + protein coding gene MORN repeat containing 2
Tssr145960 17 80290206 to 80290279 73 + TSS region transcription start site region 145960
Tssr145961 17 80307301 to 80307306 5 + TSS region transcription start site region 145961
Tssr145962 17 80307317 to 80307327 10 + TSS region transcription start site region 145962
Tssr145963 17 80307383 to 80307394 11 + TSS region transcription start site region 145963
Tssr145964 17 80307396 to 80307413 17 + TSS region transcription start site region 145964
Arhgef33 17 80307407 to 80400081 92674 + protein coding gene Rho guanine nucleotide exchange factor (GEF) 33
Tssr145965 17 80307459 to 80307469 10 + TSS region transcription start site region 145965
Cpgi9533 17 80372833 to 80374259 1426 CpG island CpG island 9533
Gm10190 17 80373218 to 80373541 323 - unclassified gene predicted gene 10190
Tssr149487 17 80373221 to 80373232 11 - TSS region transcription start site region 149487
Tssr145966 17 80373610 to 80373644 34 + TSS region transcription start site region 145966
Tssr145967 17 80373665 to 80373701 36 + TSS region transcription start site region 145967
Cpgi9534 17 80391706 to 80391996 290 CpG island CpG island 9534
Sos1 17 80393752 to 80480453 86701 - protein coding gene SOS Ras/Rac guanine nucleotide exchange factor 1
Tssr149488 17 80424777 to 80424781 4 - TSS region transcription start site region 149488
Gm18141 17 80444627 to 80445192 565 + pseudogene predicted gene, 18141
Tssr149489 17 80450631 to 80450641 10 - TSS region transcription start site region 149489