Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:79939937-80270042

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D17Mit73 17 79952498 to 79952603 105 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 73
Tssr145934 17 79955510 to 79955527 17 + TSS region transcription start site region 145934
Tssr149466 17 79973273 to 79973287 14 - TSS region transcription start site region 149466
Gm41625 17 79977353 to 79981662 4309 - lncRNA gene predicted gene, 41625
Tssr145935 17 79980628 to 79980648 20 + TSS region transcription start site region 145935
Tssr149467 17 79981613 to 79981624 11 - TSS region transcription start site region 149467
Tssr149468 17 79981628 to 79981636 8 - TSS region transcription start site region 149468
Tssr145936 17 79999876 to 79999887 11 + TSS region transcription start site region 145936
Tssr145937 17 79999906 to 79999921 15 + TSS region transcription start site region 145937
Tssr149469 17 80006264 to 80006269 5 - TSS region transcription start site region 149469
Cpgi9526 17 80019176 to 80019490 314 CpG island CpG island 9526
Tssr149470 17 80029232 to 80029236 4 - TSS region transcription start site region 149470
Hnrnpll 17 80029487 to 80062334 32847 - protein coding gene heterogeneous nuclear ribonucleoprotein L-like
Gm22215 17 80033514 to 80033609 95 + snRNA gene predicted gene, 22215
Tssr149471 17 80053362 to 80053368 6 - TSS region transcription start site region 149471
Cpgi9527 17 80054023 to 80054184 161 CpG island CpG island 9527
Gpx4-ps1 17 80054026 to 80054556 530 + pseudogene glutathione peroxidase 4, pseudogene 1
Tssr149472 17 80055369 to 80055378 9 - TSS region transcription start site region 149472
Tssr149473 17 80060999 to 80061011 12 - TSS region transcription start site region 149473
Cpgi9528 17 80061062 to 80062892 1830 CpG island CpG island 9528
Tssr145938 17 80061424 to 80061484 60 + TSS region transcription start site region 145938
Tssr145939 17 80061552 to 80061558 6 + TSS region transcription start site region 145939
Tssr149474 17 80062075 to 80062086 11 - TSS region transcription start site region 149474
Tssr149475 17 80062117 to 80062143 26 - TSS region transcription start site region 149475
Tssr149476 17 80062175 to 80062189 14 - TSS region transcription start site region 149476
Tssr149477 17 80062199 to 80062247 48 - TSS region transcription start site region 149477
4933407O12Rik 17 80062222 to 80063462 1240 + protein coding gene RIKEN cDNA 4933407O12 gene
Tssr149478 17 80062304 to 80062329 25 - TSS region transcription start site region 149478
Tssr149479 17 80062333 to 80062363 30 - TSS region transcription start site region 149479
Tssr145940 17 80062479 to 80062518 39 + TSS region transcription start site region 145940
Tssr145941 17 80062532 to 80062555 23 + TSS region transcription start site region 145941
Tssr149480 17 80062576 to 80062585 9 - TSS region transcription start site region 149480
Gm41626 17 80076355 to 80096903 20548 - lncRNA gene predicted gene, 41626
Tssr145942 17 80095493 to 80095501 8 + TSS region transcription start site region 145942
Cpgi9529 17 80096089 to 80096388 299 CpG island CpG island 9529
Gm23125 17 80104937 to 80105042 105 + snRNA gene predicted gene, 23125
Tssr145943 17 80113100 to 80113111 11 + TSS region transcription start site region 145943
Tssr145944 17 80119222 to 80119238 16 + TSS region transcription start site region 145944
Tssr145945 17 80127447 to 80127477 30 + TSS region transcription start site region 145945
Galm 17 80127457 to 80185032 57575 + protein coding gene galactose mutarotase
Tssr145946 17 80127641 to 80127684 43 + TSS region transcription start site region 145946
Tssr145947 17 80127699 to 80127710 11 + TSS region transcription start site region 145947
Tssr145948 17 80127777 to 80127824 47 + TSS region transcription start site region 145948
Tssr145949 17 80127871 to 80127874 3 + TSS region transcription start site region 145949
Tssr145950 17 80148249 to 80148263 14 + TSS region transcription start site region 145950
Tssr149481 17 80173808 to 80173815 7 - TSS region transcription start site region 149481
Tssr145951 17 80184017 to 80184026 9 + TSS region transcription start site region 145951
Gm25706 17 80196158 to 80196404 246 - unclassified non-coding RNA gene predicted gene, 25706
Srsf7 17 80200080 to 80207307 7227 - protein coding gene serine/arginine-rich splicing factor 7
Cpgi9530 17 80206195 to 80207657 1462 CpG island CpG island 9530
Tssr149482 17 80207299 to 80207308 9 - TSS region transcription start site region 149482
Tssr145952 17 80207466 to 80207517 51 + TSS region transcription start site region 145952
Tssr145953 17 80207521 to 80207543 22 + TSS region transcription start site region 145953
Ttc39d 17 80215914 to 80217936 2022 + protein coding gene tetratricopeptide repeat domain 39D
Cpgi9531 17 80224399 to 80224716 317 CpG island CpG island 9531
Gemin6 17 80224441 to 80228497 4056 + protein coding gene gem nuclear organelle associated protein 6
Tssr145954 17 80224447 to 80224493 46 + TSS region transcription start site region 145954
Tssr145955 17 80224495 to 80224510 15 + TSS region transcription start site region 145955
Tssr145956 17 80224516 to 80224525 9 + TSS region transcription start site region 145956
Tssr145957 17 80224533 to 80224550 17 + TSS region transcription start site region 145957
Tssr145958 17 80232744 to 80232748 4 + TSS region transcription start site region 145958
Dhx57 17 80238309 to 80290476 52167 - protein coding gene DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
Gm50087 17 80247102 to 80250685 3583 + antisense lncRNA gene predicted gene, 50087
Tssr149483 17 80253286 to 80253291 5 - TSS region transcription start site region 149483
Tssr145959 17 80254694 to 80254706 12 + TSS region transcription start site region 145959
Tssr149484 17 80260463 to 80260466 3 - TSS region transcription start site region 149484