Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:79808512-80059572

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm37555 17 79810308 to 79825414 15106 - unclassified gene predicted gene, 37555
1700106O07Rik 17 79811714 to 79813691 1977 unclassified gene RIKEN cDNA 1700106O07 gene
Gm49985 17 79825859 to 79826893 1034 + lincRNA gene predicted gene, 49985
Atl2 17 79848390 to 79896123 47733 - protein coding gene atlastin GTPase 2
Tssr149458 17 79857343 to 79857346 3 - TSS region transcription start site region 149458
Tssr149459 17 79871932 to 79871943 11 - TSS region transcription start site region 149459
Tssr149460 17 79882347 to 79882354 7 - TSS region transcription start site region 149460
Tssr149461 17 79891131 to 79891135 4 - TSS region transcription start site region 149461
Cpgi9524 17 79894813 to 79896508 1695 CpG island CpG island 9524
Tssr149462 17 79895957 to 79895966 9 - TSS region transcription start site region 149462
Tssr149463 17 79895995 to 79896019 24 - TSS region transcription start site region 149463
Tssr149464 17 79896028 to 79896061 33 - TSS region transcription start site region 149464
Tssr145933 17 79918901 to 79918920 19 + TSS region transcription start site region 145933
Gm6552 17 79933512 to 79934572 1060 - pseudogene predicted gene 6552
Cpgi9525 17 79934441 to 79934668 227 CpG island CpG island 9525
Tssr149465 17 79934587 to 79934600 13 - TSS region transcription start site region 149465
D17Mit73 17 79952498 to 79952603 105 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 73
Tssr145934 17 79955510 to 79955527 17 + TSS region transcription start site region 145934
Tssr149466 17 79973273 to 79973287 14 - TSS region transcription start site region 149466
Gm41625 17 79977353 to 79981662 4309 - lncRNA gene predicted gene, 41625
Tssr145935 17 79980628 to 79980648 20 + TSS region transcription start site region 145935
Tssr149467 17 79981613 to 79981624 11 - TSS region transcription start site region 149467
Tssr149468 17 79981628 to 79981636 8 - TSS region transcription start site region 149468
Tssr145936 17 79999876 to 79999887 11 + TSS region transcription start site region 145936
Tssr145937 17 79999906 to 79999921 15 + TSS region transcription start site region 145937
Tssr149469 17 80006264 to 80006269 5 - TSS region transcription start site region 149469
Cpgi9526 17 80019176 to 80019490 314 CpG island CpG island 9526
Tssr149470 17 80029232 to 80029236 4 - TSS region transcription start site region 149470
Hnrnpll 17 80029487 to 80062334 32847 - protein coding gene heterogeneous nuclear ribonucleoprotein L-like
Gm22215 17 80033514 to 80033609 95 + snRNA gene predicted gene, 22215
Tssr149471 17 80053362 to 80053368 6 - TSS region transcription start site region 149471
Cpgi9527 17 80054023 to 80054184 161 CpG island CpG island 9527
Gpx4-ps1 17 80054026 to 80054556 530 + pseudogene glutathione peroxidase 4, pseudogene 1
Tssr149472 17 80055369 to 80055378 9 - TSS region transcription start site region 149472