Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:7977695-8252788

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rsph3a 17 7945614 to 7979556 33942 + protein coding gene radial spoke 3A homolog (Chlamydomonas)
Gm1604a 17 7982522 to 8101241 118719 - protein coding gene predicted gene 1604A
Tssr146354 17 7987237 to 7987239 2 - TSS region transcription start site region 146354
Gm49673 17 8082695 to 8147788 65093 - protein coding gene predicted gene, 49673
Gm22416 17 8084075 to 8084162 87 + snoRNA gene predicted gene, 22416
D17Mit98b 17 8104167 to 8104426 259 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 98b
Gm41523 17 8115831 to 8123701 7870 - lncRNA gene predicted gene, 41523
Rnaset2a 17 8128592 to 8147827 19235 - protein coding gene ribonuclease T2A
D17Mit195b 17 8147170 to 8147262 92 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 195b
Cpgi8583 17 8147561 to 8148236 675 CpG island CpG island 8583
Tssr146355 17 8147704 to 8147734 30 - TSS region transcription start site region 146355
Fgfr1op 17 8165491 to 8196477 30986 + protein coding gene Fgfr1 oncogene partner
Tssr142513 17 8165558 to 8165593 35 + TSS region transcription start site region 142513
Cpgi8584 17 8165673 to 8165846 173 CpG island CpG island 8584
Tssr142514 17 8165917 to 8165922 5 + TSS region transcription start site region 142514
Tssr142515 17 8195948 to 8195957 9 + TSS region transcription start site region 142515
Tssr142516 17 8195964 to 8195976 12 + TSS region transcription start site region 142516
Tssr142517 17 8236031 to 8236046 15 + TSS region transcription start site region 142517
Ccr6 17 8236043 to 8257141 21098 + protein coding gene chemokine (C-C motif) receptor 6
Tssr142518 17 8236061 to 8236075 14 + TSS region transcription start site region 142518
Tssr142519 17 8236107 to 8236118 11 + TSS region transcription start site region 142519
Tssr142520 17 8238330 to 8238337 7 + TSS region transcription start site region 142520
Tssr142521 17 8245039 to 8245050 11 + TSS region transcription start site region 142521
Tssr142522 17 8245054 to 8245092 38 + TSS region transcription start site region 142522
Flal1 17 11000000 to 8000000 -3000000 QTL fatty liver accumulation QTL 1, females only