MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:78939405-79030816

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ndufaf7	17	78937136 to 78948052	10916	+	protein coding gene	NADH:ubiquinone oxidoreductase complex assembly factor 7
Prkd3	17	78949405 to 79020816	71411	-	protein coding gene	protein kinase D3
D17Mit142	17	78965900 to 78966046	146		DNA segment	DNA segment, Chr 17, Massachusetts Institute of Technology 142
D17Mit142.2	17	78966101 to 78966220	119		DNA segment	DNA segment, Chr 17, Massachusetts Institute of Technology 142.2
Tssr149427	17	78966332 to 78966352	20	-	TSS region	transcription start site region 149427
Gm41622	17	78985362 to 79001693	16331	+	lncRNA gene	predicted gene, 41622
Tssr149428	17	78985393 to 78985400	7	-	TSS region	transcription start site region 149428
Tssr149429	17	78985405 to 78985426	21	-	TSS region	transcription start site region 149429
Tssr149430	17	78985428 to 78985468	40	-	TSS region	transcription start site region 149430
Tssr145914	17	78989327 to 78989338	11	+	TSS region	transcription start site region 145914
D17Mit72	17	78993581 to 78993773	192		DNA segment	DNA segment, Chr 17, Massachusetts Institute of Technology 72
Scc4	17	78993581 to 78993773	192		QTL	colon tumor susceptibility 4
Sluc32	17	78993581 to 78993773	192		QTL	susceptibility to lung cancer 32
Cpgi9515	17	79019939 to 79021403	1464		CpG island	CpG island 9515
Tssr149431	17	79020702 to 79020710	8	-	TSS region	transcription start site region 149431
Tssr149432	17	79020740 to 79020803	63	-	TSS region	transcription start site region 149432
Tssr149433	17	79020826 to 79020859	33	-	TSS region	transcription start site region 149433