Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:78935393-79035400

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cebpz 17 78919006 to 78937066 18060 - protein coding gene CCAAT/enhancer binding protein zeta
Cpgi9514 17 78936636 to 78937578 942 CpG island CpG island 9514
Tssr149426 17 78937031 to 78937074 43 - TSS region transcription start site region 149426
Tssr145912 17 78937124 to 78937183 59 + TSS region transcription start site region 145912
Ndufaf7 17 78937136 to 78948052 10916 + protein coding gene NADH:ubiquinone oxidoreductase complex assembly factor 7
Tssr145913 17 78937210 to 78937221 11 + TSS region transcription start site region 145913
Tssr5209 17 78937237 to 78937244 7 + TSS region transcription start site region 5209
Prkd3 17 78949405 to 79020816 71411 - protein coding gene protein kinase D3
D17Mit142 17 78965900 to 78966046 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 142
D17Mit142.2 17 78966101 to 78966220 119 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 142.2
Tssr149427 17 78966332 to 78966352 20 - TSS region transcription start site region 149427
Gm41622 17 78985362 to 79001693 16331 + lncRNA gene predicted gene, 41622
Tssr149428 17 78985393 to 78985400 7 - TSS region transcription start site region 149428
Tssr149429 17 78985405 to 78985426 21 - TSS region transcription start site region 149429
Tssr149430 17 78985428 to 78985468 40 - TSS region transcription start site region 149430
Tssr145914 17 78989327 to 78989338 11 + TSS region transcription start site region 145914
Scc4 17 78993581 to 78993773 192 QTL colon tumor susceptibility 4
D17Mit72 17 78993581 to 78993773 192 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 72
Sluc32 17 78993581 to 78993773 192 QTL susceptibility to lung cancer 32
Cpgi9515 17 79019939 to 79021403 1464 CpG island CpG island 9515
Tssr149431 17 79020702 to 79020710 8 - TSS region transcription start site region 149431
Tssr149432 17 79020740 to 79020803 63 - TSS region transcription start site region 149432
Tssr149433 17 79020826 to 79020859 33 - TSS region transcription start site region 149433