Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:78913727-79775091

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103 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr149424 17 78915846 to 78915866 20 - TSS region transcription start site region 149424
Cpgi9513 17 78916243 to 78917125 882 CpG island CpG island 9513
Tssr145908 17 78916473 to 78916509 36 + TSS region transcription start site region 145908
Cebpzos 17 78916500 to 78920306 3806 + protein coding gene CCAAT/enhancer binding protein (C/EBP), zeta, opposite strand
Tssr145909 17 78916518 to 78916531 13 + TSS region transcription start site region 145909
Tssr145910 17 78916533 to 78916560 27 + TSS region transcription start site region 145910
Tssr145911 17 78916641 to 78916677 36 + TSS region transcription start site region 145911
Cebpz 17 78919006 to 78937066 18060 - protein coding gene CCAAT/enhancer binding protein zeta
Tssr149425 17 78934189 to 78934194 5 - TSS region transcription start site region 149425
Cpgi9514 17 78936636 to 78937578 942 CpG island CpG island 9514
Tssr149426 17 78937031 to 78937074 43 - TSS region transcription start site region 149426
Tssr145912 17 78937124 to 78937183 59 + TSS region transcription start site region 145912
Ndufaf7 17 78937136 to 78948052 10916 + protein coding gene NADH:ubiquinone oxidoreductase complex assembly factor 7
Tssr145913 17 78937210 to 78937221 11 + TSS region transcription start site region 145913
Tssr5209 17 78937237 to 78937244 7 + TSS region transcription start site region 5209
Prkd3 17 78949405 to 79020816 71411 - protein coding gene protein kinase D3
D17Mit142 17 78965900 to 78966046 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 142
D17Mit142.2 17 78966101 to 78966220 119 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 142.2
Tssr149427 17 78966332 to 78966352 20 - TSS region transcription start site region 149427
Gm41622 17 78985362 to 79001693 16331 + lncRNA gene predicted gene, 41622
Tssr149428 17 78985393 to 78985400 7 - TSS region transcription start site region 149428
Tssr149429 17 78985405 to 78985426 21 - TSS region transcription start site region 149429
Tssr149430 17 78985428 to 78985468 40 - TSS region transcription start site region 149430
Tssr145914 17 78989327 to 78989338 11 + TSS region transcription start site region 145914
D17Mit72 17 78993581 to 78993773 192 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 72
Scc4 17 78993581 to 78993773 192 QTL colon tumor susceptibility 4
Sluc32 17 78993581 to 78993773 192 QTL susceptibility to lung cancer 32
Cpgi9515 17 79019939 to 79021403 1464 CpG island CpG island 9515
Tssr149431 17 79020702 to 79020710 8 - TSS region transcription start site region 149431
Tssr149432 17 79020740 to 79020803 63 - TSS region transcription start site region 149432
Tssr149433 17 79020826 to 79020859 33 - TSS region transcription start site region 149433
Gm26957 17 79041946 to 79042922 976 + pseudogene predicted gene, 26957
Qpct 17 79051906 to 79090378 38472 + protein coding gene glutaminyl-peptide cyclotransferase (glutaminyl cyclase)
Cpgi9516 17 79052033 to 79052874 841 CpG island CpG island 9516
Tssr145915 17 79052231 to 79052267 36 + TSS region transcription start site region 145915
Gm49869 17 79103278 to 79103744 466 - pseudogene predicted gene, 49869
Tssr145916 17 79134165 to 79134166 1 + TSS region transcription start site region 145916
D17Mit121 17 79203586 to 79203736 150 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 121
D17Mit187 17 79232122 to 79232368 246 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 187
Gm5230 17 79257410 to 79258049 639 - pseudogene predicted gene 5230
D17Mit42 17 79316511 to 79316665 154 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 42
Cdc42ep3 17 79333727 to 79355091 21364 - protein coding gene CDC42 effector protein (Rho GTPase binding) 3
Cpgi9517 17 79345361 to 79345712 351 CpG island CpG island 9517
Cpgi9518 17 79354245 to 79356253 2008 CpG island CpG island 9518
Gm17315 17 79354699 to 79358022 3323 + lincRNA gene predicted gene, 17315
Tssr149434 17 79354860 to 79354864 4 - TSS region transcription start site region 149434
Tssr149435 17 79354868 to 79354875 7 - TSS region transcription start site region 149435
Tssr149436 17 79354882 to 79354937 55 - TSS region transcription start site region 149436
Tssr149437 17 79354943 to 79354949 6 - TSS region transcription start site region 149437
Tssr149438 17 79354989 to 79355000 11 - TSS region transcription start site region 149438
Tssr149439 17 79355048 to 79355073 25 - TSS region transcription start site region 149439
Tssr149440 17 79355082 to 79355103 21 - TSS region transcription start site region 149440
Tssr149441 17 79355623 to 79355708 85 - TSS region transcription start site region 149441
Tssr149442 17 79355748 to 79355786 38 - TSS region transcription start site region 149442
Gm32954 17 79437919 to 79451714 13795 - lncRNA gene predicted gene, 32954
Tssr149443 17 79451635 to 79451644 9 - TSS region transcription start site region 149443
Tssr149444 17 79451649 to 79451664 15 - TSS region transcription start site region 149444
Tssr149445 17 79451714 to 79451726 12 - TSS region transcription start site region 149445
Tssr149446 17 79462588 to 79462589 1 - TSS region transcription start site region 149446
4930429F11Rik 17 79475624 to 79477885 2261 - lncRNA gene RIKEN cDNA 4930429F11 gene
Gm10494 17 79506049 to 79510486 4437 - lncRNA gene predicted gene 10494
Gm41623 17 79569915 to 79615433 45518 - lncRNA gene predicted gene, 41623
Gm7283 17 79572658 to 79573035 377 + pseudogene predicted gene 7283
Tssr145917 17 79611781 to 79611788 7 + TSS region transcription start site region 145917
Tssr145918 17 79611838 to 79611858 20 + TSS region transcription start site region 145918
Rmdn2 17 79611863 to 79693192 81329 + protein coding gene regulator of microtubule dynamics 2
Cpgi9519 17 79614815 to 79615687 872 CpG island CpG island 9519
Tssr145919 17 79615033 to 79615043 10 + TSS region transcription start site region 145919
Tssr145920 17 79615058 to 79615071 13 + TSS region transcription start site region 145920
Tssr145921 17 79615192 to 79615203 11 + TSS region transcription start site region 145921
Tssr145922 17 79615208 to 79615231 23 + TSS region transcription start site region 145922
Tssr145923 17 79615236 to 79615252 16 + TSS region transcription start site region 145923
Tssr145924 17 79615255 to 79615296 41 + TSS region transcription start site region 145924
Tssr149447 17 79615446 to 79615487 41 - TSS region transcription start site region 149447
Tssr145925 17 79615516 to 79615542 26 + TSS region transcription start site region 145925
Tssr145926 17 79616862 to 79616873 11 + TSS region transcription start site region 145926
Tssr145927 17 79622813 to 79622823 10 + TSS region transcription start site region 145927
Tssr145928 17 79626653 to 79626656 3 + TSS region transcription start site region 145928
Tssr145929 17 79626669 to 79626697 28 + TSS region transcription start site region 145929
Tssr145930 17 79650300 to 79650304 4 + TSS region transcription start site region 145930
Gm33006 17 79651811 to 79667756 15945 - lncRNA gene predicted gene, 33006
Tssr145931 17 79653376 to 79653390 14 + TSS region transcription start site region 145931
Cpgi9520 17 79667653 to 79667814 161 CpG island CpG island 9520
Cyp1b1 17 79701537 to 79715061 13524 - protein coding gene cytochrome P450, family 1, subfamily b, polypeptide 1
Tssr149448 17 79707499 to 79707519 20 - TSS region transcription start site region 149448
Tssr149449 17 79707645 to 79707659 14 - TSS region transcription start site region 149449
Cpgi9521 17 79713169 to 79714704 1535 CpG island CpG island 9521
1700038P13Rik 17 79713271 to 79716983 3712 unclassified gene RIKEN cDNA 1700038P13 gene
Tssr149450 17 79713628 to 79713662 34 - TSS region transcription start site region 149450
Tssr149451 17 79713681 to 79713700 19 - TSS region transcription start site region 149451
Tssr149452 17 79713705 to 79713725 20 - TSS region transcription start site region 149452
Tssr149453 17 79714091 to 79714107 16 - TSS region transcription start site region 149453
Tssr149454 17 79714712 to 79714747 35 - TSS region transcription start site region 149454
Tssr149455 17 79714981 to 79714990 9 - TSS region transcription start site region 149455
Tssr149456 17 79715034 to 79715047 13 - TSS region transcription start site region 149456
Tssr149457 17 79715051 to 79715103 52 - TSS region transcription start site region 149457
Cpgi9522 17 79715096 to 79715286 190 CpG island CpG island 9522
Cpgi9523 17 79715618 to 79716259 641 CpG island CpG island 9523
Gm41624 17 79723832 to 79728823 4991 - lncRNA gene predicted gene, 41624
Gm33055 17 79737380 to 79745047 7667 + lncRNA gene predicted gene, 33055
Tssr145932 17 79737408 to 79737419 11 + TSS region transcription start site region 145932
D17Mit74 17 79742450 to 79742602 152 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 74
Gm49984 17 79771962 to 79775058 3096 + lincRNA gene predicted gene, 49984