Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:7818514-8038550

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fndc1 17 7738569 to 7827302 88733 - protein coding gene fibronectin type III domain containing 1
Cpgi8580 17 7826835 to 7827774 939 CpG island CpG island 8580
Tssr146349 17 7827289 to 7827310 21 - TSS region transcription start site region 146349
Cpgi8581 17 7827778 to 7827934 156 CpG island CpG island 8581
E430024P14Rik 17 7832241 to 7837272 5031 - antisense lncRNA gene RIKEN cDNA E430024P14 gene
Tssr146350 17 7871955 to 7871961 6 - TSS region transcription start site region 146350
Tssr146351 17 7874871 to 7874880 9 - TSS region transcription start site region 146351
Tssr142497 17 7875357 to 7875367 10 + TSS region transcription start site region 142497
Tssr142498 17 7875377 to 7875393 16 + TSS region transcription start site region 142498
Tssr142499 17 7878172 to 7878177 5 + TSS region transcription start site region 142499
Tssr4998 17 7879850 to 7879875 25 + TSS region transcription start site region 4998
Tssr142500 17 7925871 to 7925878 7 + TSS region transcription start site region 142500
Tssr142501 17 7925957 to 7925971 14 + TSS region transcription start site region 142501
Tssr142502 17 7925990 to 7926006 16 + TSS region transcription start site region 142502
Tagap 17 7926000 to 7934897 8897 + protein coding gene T cell activation Rho GTPase activating protein
Tssr142503 17 7926099 to 7926113 14 + TSS region transcription start site region 142503
Tssr142504 17 7926941 to 7926949 8 + TSS region transcription start site region 142504
Tssr146352 17 7927987 to 7927998 11 - TSS region transcription start site region 146352
Tssr142505 17 7928353 to 7928363 10 + TSS region transcription start site region 142505
Tssr142506 17 7928404 to 7928420 16 + TSS region transcription start site region 142506
Tssr142507 17 7928514 to 7928550 36 + TSS region transcription start site region 142507
Tssr142508 17 7929378 to 7929394 16 + TSS region transcription start site region 142508
Tssr142509 17 7931377 to 7931388 11 + TSS region transcription start site region 142509
Tssr142510 17 7945585 to 7945636 51 + TSS region transcription start site region 142510
Rsph3a 17 7945614 to 7979556 33942 + protein coding gene radial spoke 3A homolog (Chlamydomonas)
Tssr146353 17 7945844 to 7945891 47 - TSS region transcription start site region 146353
Cpgi8582 17 7945907 to 7946205 298 CpG island CpG island 8582
Tssr142511 17 7945981 to 7945990 9 + TSS region transcription start site region 142511
Tssr142512 17 7945992 to 7946041 49 + TSS region transcription start site region 142512
Gm1604a 17 7982522 to 8101241 118719 - protein coding gene predicted gene 1604A
Tssr146354 17 7987237 to 7987239 2 - TSS region transcription start site region 146354
Flal1 17 11000000 to 8000000 -3000000 QTL fatty liver accumulation QTL 1, females only