Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:7630339-7900356

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm33158 17 7631809 to 7637736 5927 - lncRNA gene predicted gene, 33158
Tssr142496 17 7645295 to 7645303 8 + TSS region transcription start site region 142496
Gm49632 17 7645328 to 7660238 14910 + lincRNA gene predicted gene, 49632
D17Mit171 17 7657011 to 7657118 107 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 171
Gm25872 17 7704840 to 7704939 99 + miRNA gene predicted gene, 25872
Fndc1 17 7738569 to 7827302 88733 - protein coding gene fibronectin type III domain containing 1
Tssr146347 17 7765228 to 7765302 74 - TSS region transcription start site region 146347
Tssr146348 17 7765339 to 7765356 17 - TSS region transcription start site region 146348
Cpgi8579 17 7771262 to 7771549 287 CpG island CpG island 8579
Gm7140 17 7812660 to 7813540 880 + pseudogene predicted gene 7140
Cpgi8580 17 7826835 to 7827774 939 CpG island CpG island 8580
Tssr146349 17 7827289 to 7827310 21 - TSS region transcription start site region 146349
Cpgi8581 17 7827778 to 7827934 156 CpG island CpG island 8581
E430024P14Rik 17 7832241 to 7837272 5031 - antisense lncRNA gene RIKEN cDNA E430024P14 gene
Tssr146350 17 7871955 to 7871961 6 - TSS region transcription start site region 146350
Tssr146351 17 7874871 to 7874880 9 - TSS region transcription start site region 146351
Tssr142497 17 7875357 to 7875367 10 + TSS region transcription start site region 142497
Tssr142498 17 7875377 to 7875393 16 + TSS region transcription start site region 142498
Tssr142499 17 7878172 to 7878177 5 + TSS region transcription start site region 142499
Tssr4998 17 7879850 to 7879875 25 + TSS region transcription start site region 4998
Phl1 17 29268449 to 7657011 -21611438 QTL progressive hearing loss 1