Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Gm33158 | 17 | 5927 | - | lncRNA gene | predicted gene, 33158 | |
Tssr142496 | 17 | 8 | + | TSS region | transcription start site region 142496 | |
Gm49632 | 17 | 14910 | + | lincRNA gene | predicted gene, 49632 | |
D17Mit171 | 17 | 107 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 171 | ||
Gm25872 | 17 | 99 | + | miRNA gene | predicted gene, 25872 | |
Fndc1 | 17 | 88733 | - | protein coding gene | fibronectin type III domain containing 1 | |
Tssr146347 | 17 | 74 | - | TSS region | transcription start site region 146347 | |
Tssr146348 | 17 | 17 | - | TSS region | transcription start site region 146348 | |
Cpgi8579 | 17 | 287 | CpG island | CpG island 8579 | ||
Gm7140 | 17 | 880 | + | pseudogene | predicted gene 7140 | |
Cpgi8580 | 17 | 939 | CpG island | CpG island 8580 | ||
Tssr146349 | 17 | 21 | - | TSS region | transcription start site region 146349 | |
Cpgi8581 | 17 | 156 | CpG island | CpG island 8581 | ||
E430024P14Rik | 17 | 5031 | - | antisense lncRNA gene | RIKEN cDNA E430024P14 gene | |
Tssr146350 | 17 | 6 | - | TSS region | transcription start site region 146350 | |
Tssr146351 | 17 | 9 | - | TSS region | transcription start site region 146351 | |
Tssr142497 | 17 | 10 | + | TSS region | transcription start site region 142497 | |
Tssr142498 | 17 | 16 | + | TSS region | transcription start site region 142498 | |
Tssr142499 | 17 | 5 | + | TSS region | transcription start site region 142499 | |
Tssr4998 | 17 | 25 | + | TSS region | transcription start site region 4998 | |
Tssr142500 | 17 | 7 | + | TSS region | transcription start site region 142500 | |
Tssr142501 | 17 | 14 | + | TSS region | transcription start site region 142501 | |
Tssr142502 | 17 | 16 | + | TSS region | transcription start site region 142502 | |
Tagap | 17 | 8897 | + | protein coding gene | T cell activation Rho GTPase activating protein | |
Tssr142503 | 17 | 14 | + | TSS region | transcription start site region 142503 | |
Tssr142504 | 17 | 8 | + | TSS region | transcription start site region 142504 | |
Tssr146352 | 17 | 11 | - | TSS region | transcription start site region 146352 | |
Tssr142505 | 17 | 10 | + | TSS region | transcription start site region 142505 | |
Tssr142506 | 17 | 16 | + | TSS region | transcription start site region 142506 | |
Tssr142507 | 17 | 36 | + | TSS region | transcription start site region 142507 | |
Tssr142508 | 17 | 16 | + | TSS region | transcription start site region 142508 | |
Tssr142509 | 17 | 11 | + | TSS region | transcription start site region 142509 | |
Tssr142510 | 17 | 51 | + | TSS region | transcription start site region 142510 | |
Rsph3a | 17 | 33942 | + | protein coding gene | radial spoke 3A homolog (Chlamydomonas) | |
Tssr146353 | 17 | 47 | - | TSS region | transcription start site region 146353 | |
Cpgi8582 | 17 | 298 | CpG island | CpG island 8582 | ||
Tssr142511 | 17 | 9 | + | TSS region | transcription start site region 142511 | |
Tssr142512 | 17 | 49 | + | TSS region | transcription start site region 142512 | |
Gm1604a | 17 | 118719 | - | protein coding gene | predicted gene 1604A | |
Tssr146354 | 17 | 2 | - | TSS region | transcription start site region 146354 | |
Gm49673 | 17 | 65093 | - | protein coding gene | predicted gene, 49673 | |
Gm22416 | 17 | 87 | + | snoRNA gene | predicted gene, 22416 | |
D17Mit98b | 17 | 259 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 98b | ||
Gm41523 | 17 | 7870 | - | lncRNA gene | predicted gene, 41523 | |
Rnaset2a | 17 | 19235 | - | protein coding gene | ribonuclease T2A | |
D17Mit195b | 17 | 92 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 195b | ||
Cpgi8583 | 17 | 675 | CpG island | CpG island 8583 | ||
Tssr146355 | 17 | 30 | - | TSS region | transcription start site region 146355 | |
Fgfr1op | 17 | 30986 | + | protein coding gene | Fgfr1 oncogene partner | |
Tssr142513 | 17 | 35 | + | TSS region | transcription start site region 142513 | |
Cpgi8584 | 17 | 173 | CpG island | CpG island 8584 | ||
Tssr142514 | 17 | 5 | + | TSS region | transcription start site region 142514 | |
Tssr142515 | 17 | 9 | + | TSS region | transcription start site region 142515 | |
Tssr142516 | 17 | 12 | + | TSS region | transcription start site region 142516 | |
Tssr142517 | 17 | 15 | + | TSS region | transcription start site region 142517 | |
Ccr6 | 17 | 21098 | + | protein coding gene | chemokine (C-C motif) receptor 6 | |
Tssr142518 | 17 | 14 | + | TSS region | transcription start site region 142518 | |
Tssr142519 | 17 | 11 | + | TSS region | transcription start site region 142519 | |
Tssr142520 | 17 | 7 | + | TSS region | transcription start site region 142520 | |
Tssr142521 | 17 | 11 | + | TSS region | transcription start site region 142521 | |
Tssr142522 | 17 | 38 | + | TSS region | transcription start site region 142522 | |
Tssr142523 | 17 | 5 | + | TSS region | transcription start site region 142523 | |
Gm33799 | 17 | 15480 | - | lncRNA gene | predicted gene, 33799 | |
Gm8465 | 17 | 1665 | + | pseudogene | predicted gene 8465 | |
Cpgi8585 | 17 | 265 | CpG island | CpG island 8585 | ||
Tssr146356 | 17 | 3 | - | TSS region | transcription start site region 146356 | |
Cpgi8586 | 17 | 1899 | CpG island | CpG island 8586 | ||
Tssr142524 | 17 | 25 | + | TSS region | transcription start site region 142524 | |
Tssr146357 | 17 | 19 | - | TSS region | transcription start site region 146357 | |
Tssr142525 | 17 | 59 | + | TSS region | transcription start site region 142525 | |
Mpc1 | 17 | 13849 | + | protein coding gene | mitochondrial pyruvate carrier 1 | |
Tssr4999 | 17 | 11 | + | TSS region | transcription start site region 4999 | |
Tssr5000 | 17 | 11 | + | TSS region | transcription start site region 5000 | |
Tssr142526 | 17 | 24 | + | TSS region | transcription start site region 142526 | |
A630084N20Rik | 17 | 2561 | unclassified gene | RIKEN cDNA A630084N20 gene | ||
4930506C21Rik | 17 | 17714 | - | lncRNA gene | RIKEN cDNA 4930506C21 gene | |
Tssr146358 | 17 | 11 | - | TSS region | transcription start site region 146358 | |
Tssr146359 | 17 | 9 | - | TSS region | transcription start site region 146359 | |
Cpgi8587 | 17 | 660 | CpG island | CpG island 8587 | ||
Tssr142527 | 17 | 11 | + | TSS region | transcription start site region 142527 | |
Tssr142528 | 17 | 67 | + | TSS region | transcription start site region 142528 | |
Sft2d1 | 17 | 16339 | + | protein coding gene | SFT2 domain containing 1 | |
Gm49987 | 17 | 85743 | + | unclassified gene | predicted gene, 49987 | |
Tssr142529 | 17 | 21 | + | TSS region | transcription start site region 142529 | |
Tssr142530 | 17 | 7 | + | TSS region | transcription start site region 142530 | |
Prr18 | 17 | 3707 | + | protein coding gene | proline rich 18 | |
Tssr142531 | 17 | 42 | + | TSS region | transcription start site region 142531 | |
Cpgi8588 | 17 | 1838 | CpG island | CpG island 8588 | ||
Tssr142532 | 17 | 25 | + | TSS region | transcription start site region 142532 | |
Tssr142533 | 17 | 21 | + | TSS region | transcription start site region 142533 | |
Tssr142534 | 17 | 7 | + | TSS region | transcription start site region 142534 | |
Tssr142535 | 17 | 37 | + | TSS region | transcription start site region 142535 | |
Tssr142536 | 17 | 21 | + | TSS region | transcription start site region 142536 | |
Tssr142537 | 17 | 20 | + | TSS region | transcription start site region 142537 | |
Gm46592 | 17 | 4021 | - | protein coding gene | predicted gene, 46592 | |
Tssr142538 | 17 | 13 | + | TSS region | transcription start site region 142538 | |
Gm46593 | 17 | 338 | - | pseudogene | predicted gene, 46593 | |
T2 | 17 | 50718 | + | protein coding gene | brachyury 2 | |
Tssr5001 | 17 | 23 | + | TSS region | transcription start site region 5001 | |
Gm16702 | 17 | 10423 | - | lincRNA gene | predicted gene, 16702 | |
Gm5491 | 17 | 607 | - | pseudogene | predicted gene 5491 | |
Cpgi8589 | 17 | 407 | CpG island | CpG island 8589 | ||
Cpgi8590 | 17 | 201 | CpG island | CpG island 8590 | ||
Gm34036 | 17 | 3592 | - | lncRNA gene | predicted gene, 34036 | |
Cpgi8591 | 17 | 178 | CpG island | CpG island 8591 | ||
Cpgi8592 | 17 | 2076 | CpG island | CpG island 8592 | ||
Tssr142539 | 17 | 18 | + | TSS region | transcription start site region 142539 | |
T | 17 | 8073 | + | protein coding gene | brachyury, T-box transcription factor T | |
D17Mit143 | 17 | 123 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 143 | ||
Obq19 | 17 | 123 | QTL | obesity QTL 19 | ||
D17Mit143.2 | 17 | 114 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 143.2 | ||
D17Mit246 | 17 | 101 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 246 | ||
Tssr142540 | 17 | 16 | + | TSS region | transcription start site region 142540 | |
Cpgi8593 | 17 | 285 | CpG island | CpG island 8593 | ||
Tssr5002 | 17 | 18 | + | TSS region | transcription start site region 5002 | |
Cpgi8594 | 17 | 237 | CpG island | CpG island 8594 | ||
Cpgi8595 | 17 | 1608 | CpG island | CpG island 8595 | ||
Tssr146360 | 17 | 26 | - | TSS region | transcription start site region 146360 | |
Tssr142541 | 17 | 16 | + | TSS region | transcription start site region 142541 | |
Tssr142542 | 17 | 42 | + | TSS region | transcription start site region 142542 | |
Tssr142543 | 17 | 9 | + | TSS region | transcription start site region 142543 | |
Tssr142544 | 17 | 27 | + | TSS region | transcription start site region 142544 | |
Pde10a | 17 | 461276 | + | protein coding gene | phosphodiesterase 10A | |
Tssr142545 | 17 | 10 | + | TSS region | transcription start site region 142545 | |
Tssr142546 | 17 | 29 | + | TSS region | transcription start site region 142546 | |
Gm15425 | 17 | 970 | - | pseudogene | predicted gene 15425 | |
Tssr142547 | 17 | 7 | + | TSS region | transcription start site region 142547 | |
Tssr146361 | 17 | 33 | - | TSS region | transcription start site region 146361 | |
Tssr146362 | 17 | 13 | - | TSS region | transcription start site region 146362 | |
Gm17087 | 17 | 1098 | - | pseudogene | predicted gene 17087 | |
Tssr146363 | 17 | 40 | - | TSS region | transcription start site region 146363 | |
Tssr142548 | 17 | 19 | + | TSS region | transcription start site region 142548 | |
Tssr142549 | 17 | 11 | + | TSS region | transcription start site region 142549 | |
Cpgi8596 | 17 | 218 | CpG island | CpG island 8596 | ||
D17Mit25b | 17 | 152 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 25b | ||
D17Mit25a | 17 | 110 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 25a | ||
5330430B06Rik | 17 | 1508 | unclassified gene | RIKEN cDNA 5330430B06 gene | ||
Tssr142550 | 17 | 14 | + | TSS region | transcription start site region 142550 | |
D17Mit170 | 17 | 284 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology-170 | ||
Gm46585 | 17 | 7481 | - | lncRNA gene | predicted gene, 46585 | |
Tssr146364 | 17 | 1 | - | TSS region | transcription start site region 146364 | |
D17Mit48 | 17 | 165 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 48 | ||
Gm15426 | 17 | 555 | - | pseudogene | predicted gene 15426 | |
Tssr142551 | 17 | 6 | + | TSS region | transcription start site region 142551 | |
Tssr142552 | 17 | 2 | + | TSS region | transcription start site region 142552 | |
Cpgi8597 | 17 | 2049 | CpG island | CpG island 8597 | ||
Tssr142553 | 17 | 21 | + | TSS region | transcription start site region 142553 | |
Tssr142554 | 17 | 37 | + | TSS region | transcription start site region 142554 | |
Tssr142555 | 17 | 42 | + | TSS region | transcription start site region 142555 | |
Tssr142556 | 17 | 15 | + | TSS region | transcription start site region 142556 | |
Tssr142557 | 17 | 9 | + | TSS region | transcription start site region 142557 | |
Tssr142558 | 17 | 20 | + | TSS region | transcription start site region 142558 | |
Cpgi8598 | 17 | 342 | CpG island | CpG island 8598 | ||
Gm34321 | 17 | 5011 | + | lncRNA gene | predicted gene, 34321 | |
Tssr142559 | 17 | 10 | + | TSS region | transcription start site region 142559 | |
Tssr142560 | 17 | 27 | + | TSS region | transcription start site region 142560 | |
Cpgi8599 | 17 | 377 | CpG island | CpG island 8599 | ||
Cpgi8600 | 17 | 468 | CpG island | CpG island 8600 | ||
Tssr146365 | 17 | 47 | - | TSS region | transcription start site region 146365 | |
Tssr142561 | 17 | 19 | + | TSS region | transcription start site region 142561 | |
C030004M13Rik | 17 | 1061 | unclassified gene | RIKEN cDNA C030004M13 gene | ||
Pifs2 | 17 | 0 | QTL | peptide-induced fatal syndrome 2 | ||
D17Mit247 | 17 | 119 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 247 | ||
Lith3 | 17 | 119 | QTL | lithogenic gene 3 | ||
D17Pri2 | 17 | 164 | DNA segment | DNA segment, Chr 17, Princeton University 2 | ||
1700010I14Rik | 17 | 19999 | + | protein coding gene | RIKEN cDNA 1700010I14 gene | |
Tssr142562 | 17 | 7 | + | TSS region | transcription start site region 142562 | |
Tssr142563 | 17 | 47 | + | TSS region | transcription start site region 142563 | |
Tssr142564 | 17 | 35 | + | TSS region | transcription start site region 142564 | |
D17Pri3 | 17 | 83 | DNA segment | DNA segment, Chr 17, Princeton University 3 | ||
D17Mit225 | 17 | 122 | DNA segment | DNA Segment, Chr 17, Massachusetts Institute of Technology 225 | ||
Tssr142565 | 17 | 5 | + | TSS region | transcription start site region 142565 | |
Cpgi8601 | 17 | 215 | CpG island | CpG island 8601 | ||
Gm29711 | 17 | 454 | + | lncRNA gene | predicted gene, 29711 | |
6530411M01Rik | 17 | 20117 | - | lincRNA gene | RIKEN cDNA 6530411M01 gene | |
Cpgi8602 | 17 | 421 | CpG island | CpG island 8602 | ||
Cpgi8603 | 17 | 175 | CpG island | CpG island 8603 | ||
C87487 | 17 | 34538 | + | lincRNA gene | expressed sequence C87487 | |
Gm49806 | 17 | 1998 | + | unclassified gene | predicted gene, 49806 | |
Gm8492 | 17 | 986 | - | pseudogene | predicted gene 8492 | |
Gm7947 | 17 | 1893 | - | pseudogene | predicted gene 7947 | |
D17Jcs100 | 17 | 203 | DNA segment | DNA segment, Chr 17, John C. Schimenti 100 | ||
Gm17748 | 17 | 521 | - | pseudogene | predicted gene, 17748 | |
Gm17728 | 17 | 398 | + | protein coding gene | predicted gene, 17728 | |
Gm49807 | 17 | 44551 | + | lincRNA gene | predicted gene, 49807 | |
Pabpc6 | 17 | 3207 | - | protein coding gene | poly(A) binding protein, cytoplasmic 6 | |
Cpgi8604 | 17 | 499 | CpG island | CpG island 8604 | ||
Tssr146366 | 17 | 14 | - | TSS region | transcription start site region 146366 | |
Tssr146367 | 17 | 37 | - | TSS region | transcription start site region 146367 | |
Tssr146368 | 17 | 9 | - | TSS region | transcription start site region 146368 | |
Tssr5003 | 17 | 4 | - | TSS region | transcription start site region 5003 | |
D17Mit97 | 17 | 144 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 97 | ||
Gm34684 | 17 | 21019 | - | lincRNA gene | predicted gene, 34684 | |
D17Jcs102 | 17 | 199 | DNA segment | DNA segment, Chr 17, John C. Schimenti 102 | ||
4930452A19Rik | 17 | 25114 | - | lncRNA gene | RIKEN cDNA 4930452A19 gene | |
Tssr146369 | 17 | 3 | - | TSS region | transcription start site region 146369 | |
Tssr146370 | 17 | 10 | - | TSS region | transcription start site region 146370 | |
Gm34883 | 17 | 1723 | - | unclassified non-coding RNA gene | predicted gene, 34883 | |
D17Mit57 | 17 | 299 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 57 | ||
Pcyts4 | 17 | 299 | QTL | plasmacytoma susceptibility 4 |