Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:74281117-77121118

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161 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Memo1 17 74199036 to 74295521 96485 - protein coding gene mediator of cell motility 1
Hmtb9 17 74282094 to 74282202 108 QTL hemostasis and thrombosis rebleeding time 9
D17Mit39 17 74282094 to 74282202 108 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 39
Aaj4 17 74282094 to 90087842 15805748 QTL anxiety in A/J 4
Axtq3 17 74282094 to 90087842 15805748 QTL anxiety QTL 3
Cpgi9493 17 74294073 to 74295917 1844 CpG island CpG island 9493
Tssr149359 17 74294776 to 74294806 30 - TSS region transcription start site region 149359
Tssr149360 17 74294820 to 74294831 11 - TSS region transcription start site region 149360
Tssr149361 17 74294834 to 74294854 20 - TSS region transcription start site region 149361
Tssr149362 17 74295017 to 74295028 11 - TSS region transcription start site region 149362
Tssr149363 17 74295058 to 74295077 19 - TSS region transcription start site region 149363
Tssr149364 17 74295094 to 74295121 27 - TSS region transcription start site region 149364
Tssr149365 17 74295430 to 74295450 20 - TSS region transcription start site region 149365
Tssr149366 17 74295474 to 74295535 61 - TSS region transcription start site region 149366
Dpy30 17 74299474 to 74323944 24470 - protein coding gene dpy-30, histone methyltransferase complex regulatory subunit
A330106M24Rik 17 74312322 to 74312837 515 unclassified gene RIKEN cDNA A330106M24 gene
Cpgi9494 17 74315774 to 74316856 1082 CpG island CpG island 9494
Tssr149367 17 74316085 to 74316107 22 - TSS region transcription start site region 149367
Tssr149368 17 74316126 to 74316137 11 - TSS region transcription start site region 149368
Tssr149369 17 74316159 to 74316171 12 - TSS region transcription start site region 149369
Tssr149370 17 74316274 to 74316285 11 - TSS region transcription start site region 149370
Tssr149371 17 74316287 to 74316305 18 - TSS region transcription start site region 149371
Tssr149372 17 74316364 to 74316377 13 - TSS region transcription start site region 149372
Tssr149373 17 74316386 to 74316434 48 - TSS region transcription start site region 149373
Tssr145824 17 74316463 to 74316476 13 + TSS region transcription start site region 145824
Tssr149374 17 74323870 to 74323872 2 - TSS region transcription start site region 149374
Tssr149375 17 74323883 to 74323886 3 - TSS region transcription start site region 149375
Tssr149376 17 74323889 to 74323895 6 - TSS region transcription start site region 149376
Tssr149377 17 74323896 to 74323954 58 - TSS region transcription start site region 149377
Gm31328 17 74327589 to 74327744 155 - pseudogene predicted gene, 31328
Gm9349 17 74329533 to 74329888 355 - pseudogene predicted gene 9349
Gm9351 17 74332008 to 74332529 521 - pseudogene predicted gene 9351
Cpgi9495 17 74338327 to 74339758 1431 CpG island CpG island 9495
Tssr149378 17 74338601 to 74338614 13 - TSS region transcription start site region 149378
Tssr145825 17 74338700 to 74338749 49 + TSS region transcription start site region 145825
Tssr145826 17 74338763 to 74338772 9 + TSS region transcription start site region 145826
Tssr145827 17 74338856 to 74338902 46 + TSS region transcription start site region 145827
Tssr145828 17 74338906 to 74338938 32 + TSS region transcription start site region 145828
Tssr145829 17 74338943 to 74338953 10 + TSS region transcription start site region 145829
Spast 17 74338987 to 74391115 52128 + protein coding gene spastin
Tssr145830 17 74339127 to 74339160 33 + TSS region transcription start site region 145830
Tssr145831 17 74339163 to 74339218 55 + TSS region transcription start site region 145831
Cpgi9496 17 74394974 to 74395932 958 CpG island CpG island 9496
Tssr145832 17 74395607 to 74395639 32 + TSS region transcription start site region 145832
Slc30a6 17 74395608 to 74424221 28613 + protein coding gene solute carrier family 30 (zinc transporter), member 6
Tssr145833 17 74395646 to 74395655 9 + TSS region transcription start site region 145833
Tssr149379 17 74402657 to 74402667 10 - TSS region transcription start site region 149379
Nlrc4 17 74426255 to 74459145 32890 - protein coding gene NLR family, CARD domain containing 4
Tssr149380 17 74436202 to 74436236 34 - TSS region transcription start site region 149380
Gm4708 17 74438285 to 74438639 354 - pseudogene predicted gene 4708
Tssr149381 17 74438654 to 74438667 13 - TSS region transcription start site region 149381
Tssr149382 17 74459096 to 74459127 31 - TSS region transcription start site region 149382
Tssr149383 17 74459136 to 74459170 34 - TSS region transcription start site region 149383
Tssr149384 17 74459189 to 74459207 18 - TSS region transcription start site region 149384
Tssr149385 17 74459223 to 74459233 10 - TSS region transcription start site region 149385
Tssr145834 17 74487227 to 74487241 14 + TSS region transcription start site region 145834
Gm6476 17 74487271 to 74488021 750 + pseudogene predicted gene 6476
Tssr149386 17 74489344 to 74489415 71 - TSS region transcription start site region 149386
Cpgi9497 17 74489418 to 74489982 564 CpG island CpG island 9497
Tssr145835 17 74489478 to 74489491 13 + TSS region transcription start site region 145835
Tssr145836 17 74489492 to 74489575 83 + TSS region transcription start site region 145836
Yipf4 17 74489493 to 74500277 10784 + protein coding gene Yip1 domain family, member 4
Tssr145837 17 74489582 to 74489593 11 + TSS region transcription start site region 145837
Tssr145838 17 74489595 to 74489606 11 + TSS region transcription start site region 145838
Tssr145839 17 74489620 to 74489631 11 + TSS region transcription start site region 145839
Tssr145840 17 74499303 to 74499306 3 + TSS region transcription start site region 145840
Gm31645 17 74519665 to 74528094 8429 - lncRNA gene predicted gene, 31645
Tssr5206 17 74523084 to 74523088 4 + TSS region transcription start site region 5206
Cpgi9498 17 74527731 to 74529436 1705 CpG island CpG island 9498
Tssr149387 17 74527910 to 74527932 22 - TSS region transcription start site region 149387
Tssr149388 17 74528062 to 74528106 44 - TSS region transcription start site region 149388
Tssr145841 17 74528279 to 74528288 9 + TSS region transcription start site region 145841
Birc6 17 74528295 to 74703356 175061 + protein coding gene baculoviral IAP repeat-containing 6
Tssr145842 17 74528324 to 74528370 46 + TSS region transcription start site region 145842
Tssr145843 17 74528396 to 74528401 5 + TSS region transcription start site region 145843
Tssr145844 17 74528422 to 74528433 11 + TSS region transcription start site region 145844
Tssr145845 17 74528435 to 74528465 30 + TSS region transcription start site region 145845
Tssr145846 17 74528467 to 74528547 80 + TSS region transcription start site region 145846
Tssr145847 17 74549583 to 74549598 15 + TSS region transcription start site region 145847
Tssr145848 17 74556781 to 74556786 5 + TSS region transcription start site region 145848
Tssr145849 17 74570603 to 74570614 11 + TSS region transcription start site region 145849
Gm26749 17 74575381 to 74617119 41738 - lincRNA gene predicted gene, 26749
Tssr145850 17 74599211 to 74599232 21 + TSS region transcription start site region 145850
Tssr145851 17 74636120 to 74636160 40 + TSS region transcription start site region 145851
Tssr145852 17 74665768 to 74665777 9 + TSS region transcription start site region 145852
Tssr145853 17 74668273 to 74668282 9 + TSS region transcription start site region 145853
Tssr145854 17 74670276 to 74670308 32 + TSS region transcription start site region 145854
Tssr145855 17 74670325 to 74670336 11 + TSS region transcription start site region 145855
Tssr145856 17 74682422 to 74682425 3 + TSS region transcription start site region 145856
Tssr145857 17 74702724 to 74702727 3 + TSS region transcription start site region 145857
Cpgi9499 17 74717576 to 74718148 572 CpG island CpG island 9499
Ttc27 17 74717736 to 74863570 145834 + protein coding gene tetratricopeptide repeat domain 27
Tssr145858 17 74717743 to 74717773 30 + TSS region transcription start site region 145858
Tssr145859 17 74770061 to 74770071 10 + TSS region transcription start site region 145859
Gm50020 17 74774811 to 74819911 45100 - antisense lncRNA gene predicted gene, 50020
Tssr149389 17 74819924 to 74819941 17 - TSS region transcription start site region 149389
Tssr145860 17 74820742 to 74820745 3 + TSS region transcription start site region 145860
Tssr145861 17 74841233 to 74841244 11 + TSS region transcription start site region 145861
Gm50021 17 74852998 to 74860934 7936 - antisense lncRNA gene predicted gene, 50021
Gm31759 17 74942192 to 74950301 8109 - lncRNA gene predicted gene, 31759
D17Dcr23 17 74944492 to 74944602 110 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 23
D17Mit241 17 74944496 to 74944604 108 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 241
Tssr149390 17 74950287 to 74950316 29 - TSS region transcription start site region 149390
Tssr5207 17 74950349 to 74950356 7 + TSS region transcription start site region 5207
Gm31818 17 74950391 to 74957814 7423 + lncRNA gene predicted gene, 31818
Cpgi9500 17 74994013 to 74994277 264 CpG island CpG island 9500
Cpgi9501 17 75005219 to 75006550 1331 CpG island CpG island 9501
Tssr145862 17 75005482 to 75005488 6 + TSS region transcription start site region 145862
Tssr145863 17 75005523 to 75005565 42 + TSS region transcription start site region 145863
Ltbp1 17 75005568 to 75392512 386944 + protein coding gene latent transforming growth factor beta binding protein 1
Tssr145864 17 75005699 to 75005726 27 + TSS region transcription start site region 145864
Tssr145865 17 75005735 to 75005786 51 + TSS region transcription start site region 145865
Tssr145866 17 75005807 to 75005823 16 + TSS region transcription start site region 145866
D17Mit111 17 75109377 to 75109517 140 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 111
Tssr145867 17 75162928 to 75162932 4 + TSS region transcription start site region 145867
Tssr145868 17 75165178 to 75165179 1 + TSS region transcription start site region 145868
Gm6276 17 75165207 to 75165785 578 + pseudogene predicted pseudogene 6276
Tssr145869 17 75178649 to 75178660 11 + TSS region transcription start site region 145869
Tssr145870 17 75178678 to 75178688 10 + TSS region transcription start site region 145870
Tssr145871 17 75178718 to 75178731 13 + TSS region transcription start site region 145871
Tssr145872 17 75178775 to 75178794 19 + TSS region transcription start site region 145872
Tssr145873 17 75178797 to 75178824 27 + TSS region transcription start site region 145873
Tssr145874 17 75178834 to 75178856 22 + TSS region transcription start site region 145874
Tssr145875 17 75178947 to 75178961 14 + TSS region transcription start site region 145875
Tssr145876 17 75182652 to 75182669 17 + TSS region transcription start site region 145876
D17Mit219 17 75365287 to 75365410 123 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 219
Tssr145877 17 75390960 to 75390964 4 + TSS region transcription start site region 145877
Tssr145878 17 75435863 to 75435885 22 + TSS region transcription start site region 145878
Tssr145879 17 75435886 to 75435937 51 + TSS region transcription start site region 145879
Rasgrp3 17 75435896 to 75529054 93158 + protein coding gene RAS, guanyl releasing protein 3
Tssr145880 17 75442452 to 75442456 4 + TSS region transcription start site region 145880
Tssr5208 17 75455656 to 75455663 7 + TSS region transcription start site region 5208
Tssr145881 17 75465278 to 75465289 11 + TSS region transcription start site region 145881
Tssr145882 17 75465480 to 75465491 11 + TSS region transcription start site region 145882
Cpgi9502 17 75465506 to 75465814 308 CpG island CpG island 9502
Tssr145883 17 75465555 to 75465568 13 + TSS region transcription start site region 145883
Tssr145884 17 75465572 to 75465590 18 + TSS region transcription start site region 145884
Tssr145885 17 75465600 to 75465625 25 + TSS region transcription start site region 145885
Tssr149391 17 75505083 to 75505094 11 - TSS region transcription start site region 149391
Tssr149392 17 75518393 to 75518422 29 - TSS region transcription start site region 149392
Tssr145886 17 75520622 to 75520627 5 + TSS region transcription start site region 145886
Tssr145887 17 75527460 to 75527464 4 + TSS region transcription start site region 145887
D17Mit1007 17 75536599 to 75536725 126 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 1007
Fam98a 17 75537086 to 75551946 14860 - protein coding gene family with sequence similarity 98, member A
Cpgi9503 17 75551360 to 75552213 853 CpG island CpG island 9503
Tssr149393 17 75551790 to 75551834 44 - TSS region transcription start site region 149393
Tssr149394 17 75551838 to 75551901 63 - TSS region transcription start site region 149394
Gm9360 17 75661240 to 75662226 986 + pseudogene predicted gene 9360
Gm46584 17 75696591 to 75706391 9800 + lncRNA gene predicted gene, 46584
Tssr149395 17 75701117 to 75701118 1 - TSS region transcription start site region 149395
Gm50099 17 75833837 to 75834256 419 + pseudogene predicted gene, 50099
Gm4710 17 75861023 to 75889039 28016 + lncRNA gene predicted gene 4710
D17Mit94 17 75878949 to 75879095 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 94
Gm24126 17 76074546 to 76074651 105 + snRNA gene predicted gene, 24126
Gm26124 17 76111197 to 76111304 107 - unclassified non-coding RNA gene predicted gene, 26124
Gm16391 17 76284415 to 76284861 446 - pseudogene predicted pseudogene 16391
Gm50028 17 76327541 to 76339195 11654 - lincRNA gene predicted gene, 50028
D17Mit127 17 76577956 to 76578072 116 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 127
Gm18366 17 76821001 to 76821502 501 - pseudogene predicted gene, 18366
Tssr149396 17 76886868 to 76886873 5 - TSS region transcription start site region 149396
Gm6496 17 76936640 to 76937041 401 + pseudogene predicted gene 6496