Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:73020654-74640695

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218 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lfnq6 17 71867893 to 73818625 1950732 QTL lung function QTL 6
Gm30420 17 73020850 to 73022176 1326 - lincRNA gene predicted gene, 30420
Gm41615 17 73027967 to 73032502 4535 - lncRNA gene predicted gene, 41615
Gm30476 17 73035998 to 73037811 1813 + lncRNA gene predicted gene, 30476
Tssr145796 17 73037088 to 73037125 37 + TSS region transcription start site region 145796
Tssr145797 17 73069438 to 73069443 5 + TSS region transcription start site region 145797
Gm41616 17 73071627 to 73084583 12956 - lncRNA gene predicted gene, 41616
Tssr149310 17 73074717 to 73074758 41 - TSS region transcription start site region 149310
Cpgi9488 17 73107732 to 73108693 961 CpG island CpG island 9488
Tssr149311 17 73107841 to 73107876 35 - TSS region transcription start site region 149311
Tssr145798 17 73107982 to 73108080 98 + TSS region transcription start site region 145798
Lclat1 17 73107985 to 73243368 135383 + protein coding gene lysocardiolipin acyltransferase 1
Tssr145799 17 73108082 to 73108087 5 + TSS region transcription start site region 145799
Tssr149312 17 73108636 to 73108672 36 - TSS region transcription start site region 149312
Tssr145800 17 73111232 to 73111239 7 + TSS region transcription start site region 145800
Tssr145801 17 73126572 to 73126585 13 + TSS region transcription start site region 145801
Tssr145802 17 73142695 to 73142709 14 + TSS region transcription start site region 145802
Tssr145803 17 73157405 to 73157410 5 + TSS region transcription start site region 145803
Tssr145804 17 73158528 to 73158532 4 + TSS region transcription start site region 145804
Tssr145805 17 73163064 to 73163109 45 + TSS region transcription start site region 145805
Gm9311 17 73190258 to 73191349 1091 - pseudogene predicted gene 9311
Gm25406 17 73193912 to 73194016 104 + snoRNA gene predicted gene, 25406
Tssr145806 17 73203809 to 73203820 11 + TSS region transcription start site region 145806
Tssr145807 17 73204119 to 73204136 17 + TSS region transcription start site region 145807
Tssr145808 17 73204144 to 73204216 72 + TSS region transcription start site region 145808
E330032C10Rik 17 73250986 to 73254144 3158 + lincRNA gene RIKEN cDNA E330032C10 gene
Capn13 17 73306456 to 73399306 92850 - protein coding gene calpain 13
Tssr145809 17 73332234 to 73332236 2 + TSS region transcription start site region 145809
Tssr149313 17 73399269 to 73399281 12 - TSS region transcription start site region 149313
Tssr149314 17 73399289 to 73399302 13 - TSS region transcription start site region 149314
Gm49875 17 73447654 to 73448075 421 + pseudogene predicted gene, 49875
Galnt14 17 73493228 to 73710453 217225 - protein coding gene polypeptide N-acetylgalactosaminyltransferase 14
Gm49876 17 73494251 to 73521142 26891 + antisense lncRNA gene predicted gene, 49876
D17Mit141 17 73494572 to 73494681 109 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 141
D17Mit186 17 73557074 to 73557184 110 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 186
D17Mit257 17 73602512 to 73602605 93 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 257
Gm49878 17 73609052 to 73635575 26523 + antisense lncRNA gene predicted gene, 49878
Gm49877 17 73615615 to 73616327 712 - pseudogene predicted gene, 49877
D630014O11Rik 17 73635591 to 73640220 4629 - sense intronic lncRNA gene RIKEN cDNA D630014O11 gene
Tssr5199 17 73637024 to 73637031 7 - TSS region transcription start site region 5199
Tssr149315 17 73637056 to 73637062 6 - TSS region transcription start site region 149315
Gm46602 17 73667041 to 73671874 4833 + lncRNA gene predicted gene, 46602
Cpgi9489 17 73709356 to 73710806 1450 CpG island CpG island 9489
Tssr149316 17 73710384 to 73710405 21 - TSS region transcription start site region 149316
Tssr149317 17 73710416 to 73710440 24 - TSS region transcription start site region 149317
D17Dcr22 17 73800646 to 73800811 165 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 22
Hbnr3 17 73800656 to 93199751 19399095 QTL Heligmosomoides bakeri nematode resistance 3
D17Mit93 17 73800656 to 73800808 152 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 93
Bmd26 17 73800656 to 73800808 152 QTL bone mineral density 26
Heal13 17 73800656 to 73800808 152 QTL wound healing/regeneration 13
Pgia20 17 73800656 to 73800808 152 QTL proteoglycan induced arthritis 20
Nrq8 17 73800656 to 73800808 152 QTL noise-induced hearing loss resistant QTL 8
Nrq8a 17 73800656 to 73800808 152 QTL noise-induced hearing loss resistant QTL 8a
Pstc5 17 73800656 to 73800808 152 QTL periosteal circumference 5
Cpgi9490 17 73804676 to 73805503 827 CpG island CpG island 9490
Tssr145810 17 73804828 to 73804839 11 + TSS region transcription start site region 145810
Ehd3 17 73804841 to 73832093 27252 + protein coding gene EH-domain containing 3
Tssr145811 17 73804854 to 73804871 17 + TSS region transcription start site region 145811
Tssr145812 17 73804883 to 73804901 18 + TSS region transcription start site region 145812
Tssr145813 17 73804902 to 73804941 39 + TSS region transcription start site region 145813
Tssr145814 17 73804945 to 73804956 11 + TSS region transcription start site region 145814
D17Mit206 17 73818508 to 73818625 117 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 206
Tssr145815 17 73830373 to 73830401 28 + TSS region transcription start site region 145815
Tssr145816 17 73830654 to 73830695 41 + TSS region transcription start site region 145816
Gm4948 17 73870431 to 73871350 919 - pseudogene predicted gene 4948
Tssr145817 17 73870765 to 73870780 15 + TSS region transcription start site region 145817
Tssr149318 17 73870799 to 73870815 16 - TSS region transcription start site region 149318
Tssr5200 17 73871098 to 73871115 17 - TSS region transcription start site region 5200
Tssr5201 17 73871198 to 73871214 16 - TSS region transcription start site region 5201
Xdh 17 73883895 to 73950196 66301 - protein coding gene xanthine dehydrogenase
Tssr149319 17 73883948 to 73883964 16 - TSS region transcription start site region 149319
Tssr149320 17 73899803 to 73899807 4 - TSS region transcription start site region 149320
Tssr149321 17 73901812 to 73901824 12 - TSS region transcription start site region 149321
Tssr149322 17 73902005 to 73902019 14 - TSS region transcription start site region 149322
Tssr149323 17 73902022 to 73902074 52 - TSS region transcription start site region 149323
Tssr149324 17 73902075 to 73902107 32 - TSS region transcription start site region 149324
Tssr149325 17 73910201 to 73910214 13 - TSS region transcription start site region 149325
Tssr149326 17 73913931 to 73913963 32 - TSS region transcription start site region 149326
Gm18068 17 73933255 to 73933898 643 - pseudogene predicted gene, 18068
Tssr149327 17 73936566 to 73936576 10 - TSS region transcription start site region 149327
Tssr5202 17 73948374 to 73948393 19 + TSS region transcription start site region 5202
Tssr145818 17 73948407 to 73948418 11 + TSS region transcription start site region 145818
Tssr145819 17 73948428 to 73948437 9 + TSS region transcription start site region 145819
Tssr145820 17 73949766 to 73949771 5 + TSS region transcription start site region 145820
Tssr149328 17 73950137 to 73950152 15 - TSS region transcription start site region 149328
Tssr149329 17 73950172 to 73950189 17 - TSS region transcription start site region 149329
Tssr5203 17 73950334 to 73950354 20 + TSS region transcription start site region 5203
Tssr149330 17 73950354 to 73950379 25 - TSS region transcription start site region 149330
Tssr145821 17 73950359 to 73950377 18 + TSS region transcription start site region 145821
Tssr149331 17 73950395 to 73950418 23 - TSS region transcription start site region 149331
Tssr149332 17 73950605 to 73950615 10 - TSS region transcription start site region 149332
Tssr5204 17 73952286 to 73952299 13 - TSS region transcription start site region 5204
Gm30983 17 73959942 to 73983970 24028 - lncRNA gene predicted gene, 30983
Gm24475 17 74000860 to 74001002 142 + snoRNA gene predicted gene, 24475
Tssr145822 17 74016697 to 74016721 24 + TSS region transcription start site region 145822
Tssr149333 17 74016837 to 74016845 8 - TSS region transcription start site region 149333
Tssr149334 17 74016900 to 74016913 13 - TSS region transcription start site region 149334
Tssr5205 17 74016916 to 74016924 8 - TSS region transcription start site region 5205
Tssr149335 17 74016927 to 74016934 7 - TSS region transcription start site region 149335
Tssr145823 17 74016974 to 74017019 45 + TSS region transcription start site region 145823
Tssr149336 17 74016998 to 74017006 8 - TSS region transcription start site region 149336
Tssr149337 17 74017040 to 74017041 1 - TSS region transcription start site region 149337
Tssr149338 17 74017070 to 74017077 7 - TSS region transcription start site region 149338
Tssr149339 17 74017101 to 74017110 9 - TSS region transcription start site region 149339
Tssr149340 17 74017143 to 74017150 7 - TSS region transcription start site region 149340
Tssr149341 17 74017199 to 74017208 9 - TSS region transcription start site region 149341
Tssr149342 17 74017355 to 74017361 6 - TSS region transcription start site region 149342
Tssr149343 17 74017461 to 74017471 10 - TSS region transcription start site region 149343
Srd5a2 17 74017706 to 74047916 30210 - protein coding gene steroid 5 alpha-reductase 2
Tssr149344 17 74021459 to 74021482 23 - TSS region transcription start site region 149344
Gm49880 17 74026998 to 74079046 52048 - unclassified gene predicted gene, 49880
Cpgi9491 17 74047260 to 74047945 685 CpG island CpG island 9491
Tssr149345 17 74047850 to 74047867 17 - TSS region transcription start site region 149345
Gm31084 17 74055754 to 74073791 18037 - lincRNA gene predicted gene, 31084
Gm31235 17 74073907 to 74080909 7002 - lncRNA gene predicted gene, 31235
Tssr149346 17 74080272 to 74080295 23 - TSS region transcription start site region 149346
Gm49881 17 74099120 to 74099291 171 - pseudogene predicted gene, 49881
Gm49882 17 74164310 to 74164574 264 - pseudogene predicted gene, 49882
D17Mit161 17 74165400 to 74165508 108 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 161
Tssr149347 17 74173761 to 74173774 13 - TSS region transcription start site region 149347
Tssr149348 17 74173828 to 74173835 7 - TSS region transcription start site region 149348
Tssr149349 17 74173851 to 74173862 11 - TSS region transcription start site region 149349
Tssr149350 17 74173880 to 74173902 22 - TSS region transcription start site region 149350
Tssr149351 17 74173905 to 74173915 10 - TSS region transcription start site region 149351
Tssr149352 17 74173918 to 74173928 10 - TSS region transcription start site region 149352
Tssr149353 17 74173936 to 74173943 7 - TSS region transcription start site region 149353
Gm49883 17 74186768 to 74190499 3731 - unclassified gene predicted gene, 49883
Tssr149354 17 74188120 to 74188123 3 - TSS region transcription start site region 149354
Tssr149355 17 74192036 to 74192042 6 - TSS region transcription start site region 149355
Memo1 17 74199036 to 74295521 96485 - protein coding gene mediator of cell motility 1
Gm9316 17 74211958 to 74214082 2124 + pseudogene predicted gene 9316
Tssr149356 17 74224982 to 74224985 3 - TSS region transcription start site region 149356
Tssr149357 17 74243508 to 74243512 4 - TSS region transcription start site region 149357
Tssr149358 17 74265824 to 74265825 1 - TSS region transcription start site region 149358
Cpgi9492 17 74272769 to 74272968 199 CpG island CpG island 9492
Axtq3 17 74282094 to 90087842 15805748 QTL anxiety QTL 3
Aaj4 17 74282094 to 90087842 15805748 QTL anxiety in A/J 4
D17Mit39 17 74282094 to 74282202 108 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 39
Hmtb9 17 74282094 to 74282202 108 QTL hemostasis and thrombosis rebleeding time 9
Cpgi9493 17 74294073 to 74295917 1844 CpG island CpG island 9493
Tssr149359 17 74294776 to 74294806 30 - TSS region transcription start site region 149359
Tssr149360 17 74294820 to 74294831 11 - TSS region transcription start site region 149360
Tssr149361 17 74294834 to 74294854 20 - TSS region transcription start site region 149361
Tssr149362 17 74295017 to 74295028 11 - TSS region transcription start site region 149362
Tssr149363 17 74295058 to 74295077 19 - TSS region transcription start site region 149363
Tssr149364 17 74295094 to 74295121 27 - TSS region transcription start site region 149364
Tssr149365 17 74295430 to 74295450 20 - TSS region transcription start site region 149365
Tssr149366 17 74295474 to 74295535 61 - TSS region transcription start site region 149366
Dpy30 17 74299474 to 74323944 24470 - protein coding gene dpy-30, histone methyltransferase complex regulatory subunit
A330106M24Rik 17 74312322 to 74312837 515 unclassified gene RIKEN cDNA A330106M24 gene
Cpgi9494 17 74315774 to 74316856 1082 CpG island CpG island 9494
Tssr149367 17 74316085 to 74316107 22 - TSS region transcription start site region 149367
Tssr149368 17 74316126 to 74316137 11 - TSS region transcription start site region 149368
Tssr149369 17 74316159 to 74316171 12 - TSS region transcription start site region 149369
Tssr149370 17 74316274 to 74316285 11 - TSS region transcription start site region 149370
Tssr149371 17 74316287 to 74316305 18 - TSS region transcription start site region 149371
Tssr149372 17 74316364 to 74316377 13 - TSS region transcription start site region 149372
Tssr149373 17 74316386 to 74316434 48 - TSS region transcription start site region 149373
Tssr145824 17 74316463 to 74316476 13 + TSS region transcription start site region 145824
Tssr149374 17 74323870 to 74323872 2 - TSS region transcription start site region 149374
Tssr149375 17 74323883 to 74323886 3 - TSS region transcription start site region 149375
Tssr149376 17 74323889 to 74323895 6 - TSS region transcription start site region 149376
Tssr149377 17 74323896 to 74323954 58 - TSS region transcription start site region 149377
Gm31328 17 74327589 to 74327744 155 - pseudogene predicted gene, 31328
Gm9349 17 74329533 to 74329888 355 - pseudogene predicted gene 9349
Gm9351 17 74332008 to 74332529 521 - pseudogene predicted gene 9351
Cpgi9495 17 74338327 to 74339758 1431 CpG island CpG island 9495
Tssr149378 17 74338601 to 74338614 13 - TSS region transcription start site region 149378
Tssr145825 17 74338700 to 74338749 49 + TSS region transcription start site region 145825
Tssr145826 17 74338763 to 74338772 9 + TSS region transcription start site region 145826
Tssr145827 17 74338856 to 74338902 46 + TSS region transcription start site region 145827
Tssr145828 17 74338906 to 74338938 32 + TSS region transcription start site region 145828
Tssr145829 17 74338943 to 74338953 10 + TSS region transcription start site region 145829
Spast 17 74338987 to 74391115 52128 + protein coding gene spastin
Tssr145830 17 74339127 to 74339160 33 + TSS region transcription start site region 145830
Tssr145831 17 74339163 to 74339218 55 + TSS region transcription start site region 145831
Cpgi9496 17 74394974 to 74395932 958 CpG island CpG island 9496
Tssr145832 17 74395607 to 74395639 32 + TSS region transcription start site region 145832
Slc30a6 17 74395608 to 74424221 28613 + protein coding gene solute carrier family 30 (zinc transporter), member 6
Tssr145833 17 74395646 to 74395655 9 + TSS region transcription start site region 145833
Tssr149379 17 74402657 to 74402667 10 - TSS region transcription start site region 149379
Nlrc4 17 74426255 to 74459145 32890 - protein coding gene NLR family, CARD domain containing 4
Tssr149380 17 74436202 to 74436236 34 - TSS region transcription start site region 149380
Gm4708 17 74438285 to 74438639 354 - pseudogene predicted gene 4708
Tssr149381 17 74438654 to 74438667 13 - TSS region transcription start site region 149381
Tssr149382 17 74459096 to 74459127 31 - TSS region transcription start site region 149382
Tssr149383 17 74459136 to 74459170 34 - TSS region transcription start site region 149383
Tssr149384 17 74459189 to 74459207 18 - TSS region transcription start site region 149384
Tssr149385 17 74459223 to 74459233 10 - TSS region transcription start site region 149385
Tssr145834 17 74487227 to 74487241 14 + TSS region transcription start site region 145834
Gm6476 17 74487271 to 74488021 750 + pseudogene predicted gene 6476
Tssr149386 17 74489344 to 74489415 71 - TSS region transcription start site region 149386
Cpgi9497 17 74489418 to 74489982 564 CpG island CpG island 9497
Tssr145835 17 74489478 to 74489491 13 + TSS region transcription start site region 145835
Tssr145836 17 74489492 to 74489575 83 + TSS region transcription start site region 145836
Yipf4 17 74489493 to 74500277 10784 + protein coding gene Yip1 domain family, member 4
Tssr145837 17 74489582 to 74489593 11 + TSS region transcription start site region 145837
Tssr145838 17 74489595 to 74489606 11 + TSS region transcription start site region 145838
Tssr145839 17 74489620 to 74489631 11 + TSS region transcription start site region 145839
Tssr145840 17 74499303 to 74499306 3 + TSS region transcription start site region 145840