Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:73007654-73888075

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lfnq6 17 71867893 to 73818625 1950732 QTL lung function QTL 6
Gm30420 17 73020850 to 73022176 1326 - lincRNA gene predicted gene, 30420
Gm41615 17 73027967 to 73032502 4535 - lncRNA gene predicted gene, 41615
Gm30476 17 73035998 to 73037811 1813 + lncRNA gene predicted gene, 30476
Tssr145796 17 73037088 to 73037125 37 + TSS region transcription start site region 145796
Tssr145797 17 73069438 to 73069443 5 + TSS region transcription start site region 145797
Gm41616 17 73071627 to 73084583 12956 - lncRNA gene predicted gene, 41616
Tssr149310 17 73074717 to 73074758 41 - TSS region transcription start site region 149310
Cpgi9488 17 73107732 to 73108693 961 CpG island CpG island 9488
Tssr149311 17 73107841 to 73107876 35 - TSS region transcription start site region 149311
Tssr145798 17 73107982 to 73108080 98 + TSS region transcription start site region 145798
Lclat1 17 73107985 to 73243368 135383 + protein coding gene lysocardiolipin acyltransferase 1
Tssr145799 17 73108082 to 73108087 5 + TSS region transcription start site region 145799
Tssr149312 17 73108636 to 73108672 36 - TSS region transcription start site region 149312
Tssr145800 17 73111232 to 73111239 7 + TSS region transcription start site region 145800
Tssr145801 17 73126572 to 73126585 13 + TSS region transcription start site region 145801
Tssr145802 17 73142695 to 73142709 14 + TSS region transcription start site region 145802
Tssr145803 17 73157405 to 73157410 5 + TSS region transcription start site region 145803
Tssr145804 17 73158528 to 73158532 4 + TSS region transcription start site region 145804
Tssr145805 17 73163064 to 73163109 45 + TSS region transcription start site region 145805
Gm9311 17 73190258 to 73191349 1091 - pseudogene predicted gene 9311
Gm25406 17 73193912 to 73194016 104 + snoRNA gene predicted gene, 25406
Tssr145806 17 73203809 to 73203820 11 + TSS region transcription start site region 145806
Tssr145807 17 73204119 to 73204136 17 + TSS region transcription start site region 145807
Tssr145808 17 73204144 to 73204216 72 + TSS region transcription start site region 145808
E330032C10Rik 17 73250986 to 73254144 3158 + lincRNA gene RIKEN cDNA E330032C10 gene
Capn13 17 73306456 to 73399306 92850 - protein coding gene calpain 13
Tssr145809 17 73332234 to 73332236 2 + TSS region transcription start site region 145809
Tssr149313 17 73399269 to 73399281 12 - TSS region transcription start site region 149313
Tssr149314 17 73399289 to 73399302 13 - TSS region transcription start site region 149314
Gm49875 17 73447654 to 73448075 421 + pseudogene predicted gene, 49875
Galnt14 17 73493228 to 73710453 217225 - protein coding gene polypeptide N-acetylgalactosaminyltransferase 14
Gm49876 17 73494251 to 73521142 26891 + antisense lncRNA gene predicted gene, 49876
D17Mit141 17 73494572 to 73494681 109 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 141
D17Mit186 17 73557074 to 73557184 110 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 186
D17Mit257 17 73602512 to 73602605 93 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 257
Gm49878 17 73609052 to 73635575 26523 + antisense lncRNA gene predicted gene, 49878
Gm49877 17 73615615 to 73616327 712 - pseudogene predicted gene, 49877
D630014O11Rik 17 73635591 to 73640220 4629 - sense intronic lncRNA gene RIKEN cDNA D630014O11 gene
Tssr5199 17 73637024 to 73637031 7 - TSS region transcription start site region 5199
Tssr149315 17 73637056 to 73637062 6 - TSS region transcription start site region 149315
Gm46602 17 73667041 to 73671874 4833 + lncRNA gene predicted gene, 46602
Cpgi9489 17 73709356 to 73710806 1450 CpG island CpG island 9489
Tssr149316 17 73710384 to 73710405 21 - TSS region transcription start site region 149316
Tssr149317 17 73710416 to 73710440 24 - TSS region transcription start site region 149317
D17Dcr22 17 73800646 to 73800811 165 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 22
Bmd26 17 73800656 to 73800808 152 QTL bone mineral density 26
D17Mit93 17 73800656 to 73800808 152 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 93
Heal13 17 73800656 to 73800808 152 QTL wound healing/regeneration 13
Pgia20 17 73800656 to 73800808 152 QTL proteoglycan induced arthritis 20
Pstc5 17 73800656 to 73800808 152 QTL periosteal circumference 5
Hbnr3 17 73800656 to 93199751 19399095 QTL Heligmosomoides bakeri nematode resistance 3
Nrq8a 17 73800656 to 73800808 152 QTL noise-induced hearing loss resistant QTL 8a
Nrq8 17 73800656 to 73800808 152 QTL noise-induced hearing loss resistant QTL 8
Cpgi9490 17 73804676 to 73805503 827 CpG island CpG island 9490
Tssr145810 17 73804828 to 73804839 11 + TSS region transcription start site region 145810
Ehd3 17 73804841 to 73832093 27252 + protein coding gene EH-domain containing 3
Tssr145811 17 73804854 to 73804871 17 + TSS region transcription start site region 145811
Tssr145812 17 73804883 to 73804901 18 + TSS region transcription start site region 145812
Tssr145813 17 73804902 to 73804941 39 + TSS region transcription start site region 145813
Tssr145814 17 73804945 to 73804956 11 + TSS region transcription start site region 145814
D17Mit206 17 73818508 to 73818625 117 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 206
Tssr145815 17 73830373 to 73830401 28 + TSS region transcription start site region 145815
Tssr145816 17 73830654 to 73830695 41 + TSS region transcription start site region 145816
Gm4948 17 73870431 to 73871350 919 - pseudogene predicted gene 4948
Tssr145817 17 73870765 to 73870780 15 + TSS region transcription start site region 145817
Tssr149318 17 73870799 to 73870815 16 - TSS region transcription start site region 149318
Tssr5200 17 73871098 to 73871115 17 - TSS region transcription start site region 5200
Tssr5201 17 73871198 to 73871214 16 - TSS region transcription start site region 5201
Xdh 17 73883895 to 73950196 66301 - protein coding gene xanthine dehydrogenase
Tssr149319 17 73883948 to 73883964 16 - TSS region transcription start site region 149319