Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:7281142-7871154

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rps6ka2 17 7170115 to 7303315 133200 + protein coding gene ribosomal protein S6 kinase, polypeptide 2
D17Jcs90 17 7286943 to 7287138 195 DNA segment DNA segment, Chr 17, John C. Schimenti 90
Gpr31a 17 7314888 to 7315846 958 - pseudogene G protein-coupled receptor 31, D17Leh66a region
Tcp10a 17 7324657 to 7345860 21203 + protein coding gene t-complex protein 10a
Tssr142494 17 7324660 to 7324677 17 + TSS region transcription start site region 142494
Ttll2 17 7350885 to 7352696 1811 - protein coding gene tubulin tyrosine ligase-like family, member 2
Gm49630 17 7352064 to 7371979 19915 - protein coding gene predicted gene, 49630
Unc93a2 17 7362815 to 7385464 22649 - protein coding gene unc-93 homolog A2
Gm26057 17 7374193 to 7374357 164 - snRNA gene predicted gene, 26057
Tssr146346 17 7397300 to 7397308 8 - TSS region transcription start site region 146346
5830477G23Rik 17 7399524 to 7406609 7085 unclassified non-coding RNA gene RIKEN cDNA 5830477G23 gene
Gm36458 17 7411244 to 7416515 5271 - lncRNA gene predicted gene, 36458
Gm6553 17 7429287 to 7430242 955 - pseudogene predicted gene 6553
Tssr142495 17 7576142 to 7576154 12 + TSS region transcription start site region 142495
Gm33086 17 7576190 to 7578389 2199 + lincRNA gene predicted gene, 33086
Gm33158 17 7631809 to 7637736 5927 - lncRNA gene predicted gene, 33158
Tssr142496 17 7645295 to 7645303 8 + TSS region transcription start site region 142496
Gm49632 17 7645328 to 7660238 14910 + lincRNA gene predicted gene, 49632
D17Mit171 17 7657011 to 7657118 107 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 171
Gm25872 17 7704840 to 7704939 99 + miRNA gene predicted gene, 25872
Fndc1 17 7738569 to 7827302 88733 - protein coding gene fibronectin type III domain containing 1
Tssr146347 17 7765228 to 7765302 74 - TSS region transcription start site region 146347
Tssr146348 17 7765339 to 7765356 17 - TSS region transcription start site region 146348
Cpgi8579 17 7771262 to 7771549 287 CpG island CpG island 8579
Gm7140 17 7812660 to 7813540 880 + pseudogene predicted gene 7140
Cpgi8580 17 7826835 to 7827774 939 CpG island CpG island 8580
Tssr146349 17 7827289 to 7827310 21 - TSS region transcription start site region 146349
Cpgi8581 17 7827778 to 7827934 156 CpG island CpG island 8581
E430024P14Rik 17 7832241 to 7837272 5031 - antisense lncRNA gene RIKEN cDNA E430024P14 gene
Phl1 17 29268449 to 7657011 -21611438 QTL progressive hearing loss 1