Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:72471444-73481449

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Alk 17 71868972 to 72604627 735655 - protein coding gene anaplastic lymphoma kinase
D17Mit92 17 72492020 to 72492280 260 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 92
Gm24736 17 72499289 to 72499418 129 - snRNA gene predicted gene, 24736
Gm49923 17 72520282 to 72522643 2361 - unclassified gene predicted gene, 49923
Tssr149303 17 72593614 to 72593625 11 - TSS region transcription start site region 149303
Cpgi9485 17 72602993 to 72604904 1911 CpG island CpG island 9485
Tssr149304 17 72604633 to 72604645 12 - TSS region transcription start site region 149304
Tssr149305 17 72604658 to 72604676 18 - TSS region transcription start site region 149305
Gm26963 17 72699505 to 72700445 940 - pseudogene predicted gene, 26963
Cpgi9486 17 72836117 to 72837909 1792 CpG island CpG island 9486
Tssr5197 17 72836144 to 72836155 11 - TSS region transcription start site region 5197
Tssr145775 17 72836656 to 72836659 3 + TSS region transcription start site region 145775
Tssr145776 17 72836678 to 72836717 39 + TSS region transcription start site region 145776
Ypel5 17 72836704 to 72851195 14491 + protein coding gene yippee like 5
Tssr145777 17 72836724 to 72836750 26 + TSS region transcription start site region 145777
Tssr149306 17 72837469 to 72837502 33 - TSS region transcription start site region 149306
Tssr145778 17 72837553 to 72837622 69 + TSS region transcription start site region 145778
Tssr145779 17 72837624 to 72837656 32 + TSS region transcription start site region 145779
Tssr145780 17 72838044 to 72838045 1 + TSS region transcription start site region 145780
Tssr145781 17 72848964 to 72848975 11 + TSS region transcription start site region 145781
Gm30256 17 72871327 to 72896256 24929 + lncRNA gene predicted gene, 30256
Tssr145782 17 72871676 to 72871691 15 + TSS region transcription start site region 145782
Tssr145783 17 72871694 to 72871711 17 + TSS region transcription start site region 145783
Tssr145784 17 72871722 to 72871744 22 + TSS region transcription start site region 145784
Tssr145785 17 72911527 to 72911537 10 + TSS region transcription start site region 145785
Tssr5198 17 72913017 to 72913033 16 - TSS region transcription start site region 5198
Gm30375 17 72914744 to 72918199 3455 - lncRNA gene predicted gene, 30375
Cpgi9487 17 72917490 to 72919528 2038 CpG island CpG island 9487
Tssr149307 17 72918151 to 72918160 9 - TSS region transcription start site region 149307
Tssr145786 17 72918298 to 72918316 18 + TSS region transcription start site region 145786
Lbh 17 72918305 to 72941946 23641 + protein coding gene limb-bud and heart
Tssr145787 17 72918495 to 72918547 52 + TSS region transcription start site region 145787
Tssr145788 17 72921156 to 72921171 15 + TSS region transcription start site region 145788
Tssr145789 17 72938342 to 72938349 7 + TSS region transcription start site region 145789
Tssr145790 17 72938385 to 72938392 7 + TSS region transcription start site region 145790
Tssr145791 17 72939621 to 72939635 14 + TSS region transcription start site region 145791
Tssr145792 17 72939720 to 72939740 20 + TSS region transcription start site region 145792
Tssr149308 17 72939920 to 72939934 14 - TSS region transcription start site region 149308
Tssr145793 17 72941275 to 72941340 65 + TSS region transcription start site region 145793
Tssr145794 17 72941593 to 72941608 15 + TSS region transcription start site region 145794
Tssr149309 17 72976444 to 72976449 5 - TSS region transcription start site region 149309
Gm23649 17 72987798 to 72987904 106 + snRNA gene predicted gene, 23649
Tssr145795 17 72996749 to 72996758 9 + TSS region transcription start site region 145795
Gm30420 17 73020850 to 73022176 1326 - lincRNA gene predicted gene, 30420
Gm41615 17 73027967 to 73032502 4535 - lncRNA gene predicted gene, 41615
Gm30476 17 73035998 to 73037811 1813 + lncRNA gene predicted gene, 30476
Tssr145796 17 73037088 to 73037125 37 + TSS region transcription start site region 145796
Tssr145797 17 73069438 to 73069443 5 + TSS region transcription start site region 145797
Gm41616 17 73071627 to 73084583 12956 - lncRNA gene predicted gene, 41616
Tssr149310 17 73074717 to 73074758 41 - TSS region transcription start site region 149310
Cpgi9488 17 73107732 to 73108693 961 CpG island CpG island 9488
Tssr149311 17 73107841 to 73107876 35 - TSS region transcription start site region 149311
Tssr145798 17 73107982 to 73108080 98 + TSS region transcription start site region 145798
Lclat1 17 73107985 to 73243368 135383 + protein coding gene lysocardiolipin acyltransferase 1
Tssr145799 17 73108082 to 73108087 5 + TSS region transcription start site region 145799
Tssr149312 17 73108636 to 73108672 36 - TSS region transcription start site region 149312
Tssr145800 17 73111232 to 73111239 7 + TSS region transcription start site region 145800
Tssr145801 17 73126572 to 73126585 13 + TSS region transcription start site region 145801
Tssr145802 17 73142695 to 73142709 14 + TSS region transcription start site region 145802
Tssr145803 17 73157405 to 73157410 5 + TSS region transcription start site region 145803
Tssr145804 17 73158528 to 73158532 4 + TSS region transcription start site region 145804
Tssr145805 17 73163064 to 73163109 45 + TSS region transcription start site region 145805
Gm9311 17 73190258 to 73191349 1091 - pseudogene predicted gene 9311
Gm25406 17 73193912 to 73194016 104 + snoRNA gene predicted gene, 25406
Tssr145806 17 73203809 to 73203820 11 + TSS region transcription start site region 145806
Tssr145807 17 73204119 to 73204136 17 + TSS region transcription start site region 145807
Tssr145808 17 73204144 to 73204216 72 + TSS region transcription start site region 145808
E330032C10Rik 17 73250986 to 73254144 3158 + lincRNA gene RIKEN cDNA E330032C10 gene
Capn13 17 73306456 to 73399306 92850 - protein coding gene calpain 13
Tssr145809 17 73332234 to 73332236 2 + TSS region transcription start site region 145809
Tssr149313 17 73399269 to 73399281 12 - TSS region transcription start site region 149313
Tssr149314 17 73399289 to 73399302 13 - TSS region transcription start site region 149314
Gm49875 17 73447654 to 73448075 421 + pseudogene predicted gene, 49875