Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:72104633-73104645

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Alk 17 71868972 to 72604627 735655 - protein coding gene anaplastic lymphoma kinase
Gm41613 17 72129482 to 72136386 6904 + lncRNA gene predicted gene, 41613
Gm19183 17 72256258 to 72257146 888 + pseudogene predicted gene, 19183
D17Mit92 17 72492020 to 72492280 260 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 92
Gm24736 17 72499289 to 72499418 129 - snRNA gene predicted gene, 24736
Gm49923 17 72520282 to 72522643 2361 - unclassified gene predicted gene, 49923
Tssr149303 17 72593614 to 72593625 11 - TSS region transcription start site region 149303
Cpgi9485 17 72602993 to 72604904 1911 CpG island CpG island 9485
Tssr149304 17 72604633 to 72604645 12 - TSS region transcription start site region 149304
Tssr149305 17 72604658 to 72604676 18 - TSS region transcription start site region 149305
Gm26963 17 72699505 to 72700445 940 - pseudogene predicted gene, 26963
Cpgi9486 17 72836117 to 72837909 1792 CpG island CpG island 9486
Tssr5197 17 72836144 to 72836155 11 - TSS region transcription start site region 5197
Tssr145775 17 72836656 to 72836659 3 + TSS region transcription start site region 145775
Tssr145776 17 72836678 to 72836717 39 + TSS region transcription start site region 145776
Ypel5 17 72836704 to 72851195 14491 + protein coding gene yippee like 5
Tssr145777 17 72836724 to 72836750 26 + TSS region transcription start site region 145777
Tssr149306 17 72837469 to 72837502 33 - TSS region transcription start site region 149306
Tssr145778 17 72837553 to 72837622 69 + TSS region transcription start site region 145778
Tssr145779 17 72837624 to 72837656 32 + TSS region transcription start site region 145779
Tssr145780 17 72838044 to 72838045 1 + TSS region transcription start site region 145780
Tssr145781 17 72848964 to 72848975 11 + TSS region transcription start site region 145781
Gm30256 17 72871327 to 72896256 24929 + lncRNA gene predicted gene, 30256
Tssr145782 17 72871676 to 72871691 15 + TSS region transcription start site region 145782
Tssr145783 17 72871694 to 72871711 17 + TSS region transcription start site region 145783
Tssr145784 17 72871722 to 72871744 22 + TSS region transcription start site region 145784
Tssr145785 17 72911527 to 72911537 10 + TSS region transcription start site region 145785
Tssr5198 17 72913017 to 72913033 16 - TSS region transcription start site region 5198
Gm30375 17 72914744 to 72918199 3455 - lncRNA gene predicted gene, 30375
Cpgi9487 17 72917490 to 72919528 2038 CpG island CpG island 9487
Tssr149307 17 72918151 to 72918160 9 - TSS region transcription start site region 149307
Tssr145786 17 72918298 to 72918316 18 + TSS region transcription start site region 145786
Lbh 17 72918305 to 72941946 23641 + protein coding gene limb-bud and heart
Tssr145787 17 72918495 to 72918547 52 + TSS region transcription start site region 145787
Tssr145788 17 72921156 to 72921171 15 + TSS region transcription start site region 145788
Tssr145789 17 72938342 to 72938349 7 + TSS region transcription start site region 145789
Tssr145790 17 72938385 to 72938392 7 + TSS region transcription start site region 145790
Tssr145791 17 72939621 to 72939635 14 + TSS region transcription start site region 145791
Tssr145792 17 72939720 to 72939740 20 + TSS region transcription start site region 145792
Tssr149308 17 72939920 to 72939934 14 - TSS region transcription start site region 149308
Tssr145793 17 72941275 to 72941340 65 + TSS region transcription start site region 145793
Tssr145794 17 72941593 to 72941608 15 + TSS region transcription start site region 145794
Tssr149309 17 72976444 to 72976449 5 - TSS region transcription start site region 149309
Gm23649 17 72987798 to 72987904 106 + snRNA gene predicted gene, 23649
Tssr145795 17 72996749 to 72996758 9 + TSS region transcription start site region 145795
Gm30420 17 73020850 to 73022176 1326 - lincRNA gene predicted gene, 30420
Gm41615 17 73027967 to 73032502 4535 - lncRNA gene predicted gene, 41615
Gm30476 17 73035998 to 73037811 1813 + lncRNA gene predicted gene, 30476
Tssr145796 17 73037088 to 73037125 37 + TSS region transcription start site region 145796
Tssr145797 17 73069438 to 73069443 5 + TSS region transcription start site region 145797
Gm41616 17 73071627 to 73084583 12956 - lncRNA gene predicted gene, 41616
Tssr149310 17 73074717 to 73074758 41 - TSS region transcription start site region 149310