Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:71769633-73439645

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96 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30140 17 71766888 to 71782562 15674 - lncRNA gene predicted gene, 30140
Tssr145763 17 71769651 to 71769660 9 + TSS region transcription start site region 145763
Clip4 17 71769672 to 71864210 94538 + protein coding gene CAP-GLY domain containing linker protein family, member 4
Tssr145764 17 71769673 to 71769678 5 + TSS region transcription start site region 145764
Tssr145765 17 71769684 to 71769725 41 + TSS region transcription start site region 145765
Tssr145766 17 71769729 to 71769749 20 + TSS region transcription start site region 145766
Tssr145767 17 71781215 to 71781221 6 + TSS region transcription start site region 145767
Tssr145768 17 71781242 to 71781253 11 + TSS region transcription start site region 145768
Tssr145769 17 71781275 to 71781284 9 + TSS region transcription start site region 145769
Tssr145770 17 71781287 to 71781306 19 + TSS region transcription start site region 145770
Tssr145771 17 71781315 to 71781332 17 + TSS region transcription start site region 145771
Cpgi9482 17 71782097 to 71783491 1394 CpG island CpG island 9482
Tssr145772 17 71782587 to 71782632 45 + TSS region transcription start site region 145772
Tssr145773 17 71782634 to 71782721 87 + TSS region transcription start site region 145773
Tssr5196 17 71787204 to 71787228 24 + TSS region transcription start site region 5196
Tssr145774 17 71800781 to 71800821 40 + TSS region transcription start site region 145774
D17Mit218 17 71867893 to 71868008 115 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 218
Lfnq6 17 71867893 to 73818625 1950732 QTL lung function QTL 6
Alk 17 71868972 to 72604627 735655 - protein coding gene anaplastic lymphoma kinase
Cpgi9483 17 71869381 to 71870105 724 CpG island CpG island 9483
D17Mit120 17 71891415 to 71891545 130 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 120
Gm49924 17 71925232 to 71927030 1798 - unclassified gene predicted gene, 49924
Cpgi9484 17 72079116 to 72079399 283 CpG island CpG island 9484
Gm41613 17 72129482 to 72136386 6904 + lncRNA gene predicted gene, 41613
Gm19183 17 72256258 to 72257146 888 + pseudogene predicted gene, 19183
D17Mit92 17 72492020 to 72492280 260 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 92
Gm24736 17 72499289 to 72499418 129 - snRNA gene predicted gene, 24736
Gm49923 17 72520282 to 72522643 2361 - unclassified gene predicted gene, 49923
Tssr149303 17 72593614 to 72593625 11 - TSS region transcription start site region 149303
Cpgi9485 17 72602993 to 72604904 1911 CpG island CpG island 9485
Tssr149304 17 72604633 to 72604645 12 - TSS region transcription start site region 149304
Tssr149305 17 72604658 to 72604676 18 - TSS region transcription start site region 149305
Gm26963 17 72699505 to 72700445 940 - pseudogene predicted gene, 26963
Cpgi9486 17 72836117 to 72837909 1792 CpG island CpG island 9486
Tssr5197 17 72836144 to 72836155 11 - TSS region transcription start site region 5197
Tssr145775 17 72836656 to 72836659 3 + TSS region transcription start site region 145775
Tssr145776 17 72836678 to 72836717 39 + TSS region transcription start site region 145776
Ypel5 17 72836704 to 72851195 14491 + protein coding gene yippee like 5
Tssr145777 17 72836724 to 72836750 26 + TSS region transcription start site region 145777
Tssr149306 17 72837469 to 72837502 33 - TSS region transcription start site region 149306
Tssr145778 17 72837553 to 72837622 69 + TSS region transcription start site region 145778
Tssr145779 17 72837624 to 72837656 32 + TSS region transcription start site region 145779
Tssr145780 17 72838044 to 72838045 1 + TSS region transcription start site region 145780
Tssr145781 17 72848964 to 72848975 11 + TSS region transcription start site region 145781
Gm30256 17 72871327 to 72896256 24929 + lncRNA gene predicted gene, 30256
Tssr145782 17 72871676 to 72871691 15 + TSS region transcription start site region 145782
Tssr145783 17 72871694 to 72871711 17 + TSS region transcription start site region 145783
Tssr145784 17 72871722 to 72871744 22 + TSS region transcription start site region 145784
Tssr145785 17 72911527 to 72911537 10 + TSS region transcription start site region 145785
Tssr5198 17 72913017 to 72913033 16 - TSS region transcription start site region 5198
Gm30375 17 72914744 to 72918199 3455 - lncRNA gene predicted gene, 30375
Cpgi9487 17 72917490 to 72919528 2038 CpG island CpG island 9487
Tssr149307 17 72918151 to 72918160 9 - TSS region transcription start site region 149307
Tssr145786 17 72918298 to 72918316 18 + TSS region transcription start site region 145786
Lbh 17 72918305 to 72941946 23641 + protein coding gene limb-bud and heart
Tssr145787 17 72918495 to 72918547 52 + TSS region transcription start site region 145787
Tssr145788 17 72921156 to 72921171 15 + TSS region transcription start site region 145788
Tssr145789 17 72938342 to 72938349 7 + TSS region transcription start site region 145789
Tssr145790 17 72938385 to 72938392 7 + TSS region transcription start site region 145790
Tssr145791 17 72939621 to 72939635 14 + TSS region transcription start site region 145791
Tssr145792 17 72939720 to 72939740 20 + TSS region transcription start site region 145792
Tssr149308 17 72939920 to 72939934 14 - TSS region transcription start site region 149308
Tssr145793 17 72941275 to 72941340 65 + TSS region transcription start site region 145793
Tssr145794 17 72941593 to 72941608 15 + TSS region transcription start site region 145794
Tssr149309 17 72976444 to 72976449 5 - TSS region transcription start site region 149309
Gm23649 17 72987798 to 72987904 106 + snRNA gene predicted gene, 23649
Tssr145795 17 72996749 to 72996758 9 + TSS region transcription start site region 145795
Gm30420 17 73020850 to 73022176 1326 - lincRNA gene predicted gene, 30420
Gm41615 17 73027967 to 73032502 4535 - lncRNA gene predicted gene, 41615
Gm30476 17 73035998 to 73037811 1813 + lncRNA gene predicted gene, 30476
Tssr145796 17 73037088 to 73037125 37 + TSS region transcription start site region 145796
Tssr145797 17 73069438 to 73069443 5 + TSS region transcription start site region 145797
Gm41616 17 73071627 to 73084583 12956 - lncRNA gene predicted gene, 41616
Tssr149310 17 73074717 to 73074758 41 - TSS region transcription start site region 149310
Cpgi9488 17 73107732 to 73108693 961 CpG island CpG island 9488
Tssr149311 17 73107841 to 73107876 35 - TSS region transcription start site region 149311
Tssr145798 17 73107982 to 73108080 98 + TSS region transcription start site region 145798
Lclat1 17 73107985 to 73243368 135383 + protein coding gene lysocardiolipin acyltransferase 1
Tssr145799 17 73108082 to 73108087 5 + TSS region transcription start site region 145799
Tssr149312 17 73108636 to 73108672 36 - TSS region transcription start site region 149312
Tssr145800 17 73111232 to 73111239 7 + TSS region transcription start site region 145800
Tssr145801 17 73126572 to 73126585 13 + TSS region transcription start site region 145801
Tssr145802 17 73142695 to 73142709 14 + TSS region transcription start site region 145802
Tssr145803 17 73157405 to 73157410 5 + TSS region transcription start site region 145803
Tssr145804 17 73158528 to 73158532 4 + TSS region transcription start site region 145804
Tssr145805 17 73163064 to 73163109 45 + TSS region transcription start site region 145805
Gm9311 17 73190258 to 73191349 1091 - pseudogene predicted gene 9311
Gm25406 17 73193912 to 73194016 104 + snoRNA gene predicted gene, 25406
Tssr145806 17 73203809 to 73203820 11 + TSS region transcription start site region 145806
Tssr145807 17 73204119 to 73204136 17 + TSS region transcription start site region 145807
Tssr145808 17 73204144 to 73204216 72 + TSS region transcription start site region 145808
E330032C10Rik 17 73250986 to 73254144 3158 + lincRNA gene RIKEN cDNA E330032C10 gene
Capn13 17 73306456 to 73399306 92850 - protein coding gene calpain 13
Tssr145809 17 73332234 to 73332236 2 + TSS region transcription start site region 145809
Tssr149313 17 73399269 to 73399281 12 - TSS region transcription start site region 149313
Tssr149314 17 73399289 to 73399302 13 - TSS region transcription start site region 149314