Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:71616849-71817817

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi9478 17 71615958 to 71617227 1269 CpG island CpG island 9478
Wdr43 17 71616174 to 71659031 42857 + protein coding gene WD repeat domain 43
Snord92 17 71631279 to 71631361 82 + snoRNA gene small nucleolar RNA, C/D box 92
Snord53 17 71640889 to 71640956 67 + snoRNA gene small nucleolar RNA, C/D box 53
Gm22858 17 71641584 to 71641659 75 + snoRNA gene predicted gene, 22858
Tssr145755 17 71642797 to 71642804 7 + TSS region transcription start site region 145755
Tssr145756 17 71654051 to 71654056 5 + TSS region transcription start site region 145756
Tssr145757 17 71657515 to 71657556 41 + TSS region transcription start site region 145757
Cpgi9479 17 71662779 to 71662992 213 CpG island CpG island 9479
Tssr145758 17 71673210 to 71673220 10 + TSS region transcription start site region 145758
Tssr145759 17 71673232 to 71673241 9 + TSS region transcription start site region 145759
Tssr145760 17 71673255 to 71673271 16 + TSS region transcription start site region 145760
Togaram2 17 71673261 to 71729669 56408 + protein coding gene TOG array regulator of axonemal microtubules 2
Tssr145761 17 71673277 to 71673288 11 + TSS region transcription start site region 145761
Cpgi9480 17 71674994 to 71675373 379 CpG island CpG island 9480
Tssr149299 17 71680700 to 71680704 4 - TSS region transcription start site region 149299
Tssr145762 17 71684632 to 71684646 14 + TSS region transcription start site region 145762
Gm15641 17 71716849 to 71717817 968 - antisense lncRNA gene predicted gene 15641
Pcare 17 71743555 to 71752885 9330 - protein coding gene photoreceptor cilium actin regulator
Cpgi9481 17 71751841 to 71752098 257 CpG island CpG island 9481
Tssr149300 17 71752867 to 71752891 24 - TSS region transcription start site region 149300
Tssr149301 17 71752901 to 71752917 16 - TSS region transcription start site region 149301
Tssr149302 17 71752920 to 71752925 5 - TSS region transcription start site region 149302
Gm49922 17 71755149 to 71756762 1613 - unclassified gene predicted gene, 49922
Gm30140 17 71766888 to 71782562 15674 - lncRNA gene predicted gene, 30140
Tssr145763 17 71769651 to 71769660 9 + TSS region transcription start site region 145763
Clip4 17 71769672 to 71864210 94538 + protein coding gene CAP-GLY domain containing linker protein family, member 4
Tssr145764 17 71769673 to 71769678 5 + TSS region transcription start site region 145764
Tssr145765 17 71769684 to 71769725 41 + TSS region transcription start site region 145765
Tssr145766 17 71769729 to 71769749 20 + TSS region transcription start site region 145766
Tssr145767 17 71781215 to 71781221 6 + TSS region transcription start site region 145767
Tssr145768 17 71781242 to 71781253 11 + TSS region transcription start site region 145768
Tssr145769 17 71781275 to 71781284 9 + TSS region transcription start site region 145769
Tssr145770 17 71781287 to 71781306 19 + TSS region transcription start site region 145770
Tssr145771 17 71781315 to 71781332 17 + TSS region transcription start site region 145771
Cpgi9482 17 71782097 to 71783491 1394 CpG island CpG island 9482
Tssr145772 17 71782587 to 71782632 45 + TSS region transcription start site region 145772
Tssr145773 17 71782634 to 71782721 87 + TSS region transcription start site region 145773
Tssr5196 17 71787204 to 71787228 24 + TSS region transcription start site region 5196
Tssr145774 17 71800781 to 71800821 40 + TSS region transcription start site region 145774