Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:71380477-71570505

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26561 17 70878078 to 71393284 515206 + lincRNA gene predicted gene, 26561
Smchd1 17 71344489 to 71475343 130854 - protein coding gene SMC hinge domain containing 1
Gm38220 17 71391838 to 71393284 1446 - unclassified gene predicted gene, 38220
Gm49916 17 71421547 to 71421697 150 + pseudogene predicted gene, 49916
Tssr149285 17 71452878 to 71452883 5 - TSS region transcription start site region 149285
Tssr149286 17 71455668 to 71455685 17 - TSS region transcription start site region 149286
D17Wsu164e 17 71458201 to 71458436 235 DNA segment DNA segment, Chr 17, Wayne State University 164, expressed
Gm4707 17 71458327 to 71459918 1591 - pseudogene predicted gene 4707
Cpgi9474 17 71474581 to 71476097 1516 CpG island CpG island 9474
Tssr149287 17 71475285 to 71475340 55 - TSS region transcription start site region 149287
Tssr149288 17 71475348 to 71475359 11 - TSS region transcription start site region 149288
Tssr149289 17 71475360 to 71475371 11 - TSS region transcription start site region 149289
Tssr149290 17 71475477 to 71475505 28 - TSS region transcription start site region 149290
Tssr149291 17 71475515 to 71475526 11 - TSS region transcription start site region 149291
Tssr149292 17 71475891 to 71475903 12 - TSS region transcription start site region 149292
Gm18738 17 71483392 to 71483914 522 + pseudogene predicted gene, 18738
Tssr149293 17 71486336 to 71486361 25 - TSS region transcription start site region 149293
Ndc80 17 71496100 to 71526857 30757 - protein coding gene NDC80 kinetochore complex component
Gm23115 17 71506436 to 71506543 107 - rRNA gene predicted gene, 23115
Cpgi9475 17 71526385 to 71527360 975 CpG island CpG island 9475
Tssr149294 17 71526758 to 71526817 59 - TSS region transcription start site region 149294
Tssr149295 17 71526819 to 71526837 18 - TSS region transcription start site region 149295
Mettl4-ps1 17 71528986 to 71544207 15221 + pseudogene methyltransferase like 4, pseudogene 1
Cpgi9476 17 71551590 to 71552608 1018 CpG island CpG island 9476
Tssr145751 17 71552031 to 71552079 48 + TSS region transcription start site region 145751
Spdya 17 71552061 to 71589533 37472 + protein coding gene speedy/RINGO cell cycle regulator family, member A
Tssr145752 17 71552083 to 71552094 11 + TSS region transcription start site region 145752
Trmt61b 17 71557027 to 71598755 41728 - unclassified non-coding RNA gene tRNA methyltransferase 61B
Gm18140 17 71569786 to 71570419 633 + pseudogene predicted gene, 18140
Tssr145753 17 71569826 to 71569831 5 + TSS region transcription start site region 145753